Gene Coch_0251 details

Gene Information

• Locus tag: Coch_0251
• ID: 8366656
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: +
• Start bp: 324706
• End bp: 326784
• Gene Length: 2079 bp
• Protein Length: 692 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 644982671
• Product: hypothetical protein
• Protein accession: YP_003140375
• Protein GI: 256819096

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.614508
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTCC TTTTAACCAG CTTACTATTA GTTTATTTTA TGACCACTAC AGCGCAAGAA 
GTAGTGCCTG AAACACCTTT GGATACGATT GTGCTCAATG AGGTAATTGT AAAAGCACAG 
CGCAAAACAC AATATACCGA TAAGGCGAGC TTTACCTTTG AAAAGAAAGC TGTGGAACAA 
GCACGCTATG CCAAAGACCT CTTGCGCAGT TTGCCTAACC TGCACCTCAA TCCTGTAACC 
AACCAGATTG CTACCCTTAA AAGGGGTACG CTCTTGGTAT TGGTAAACGG TGTAGAGGCA 
ACTGACTTGC AAATACGCGG TATTGCCCCT CAAAACGTGG CACGCATAGA CTATTACGAT 
ATTCCGCCTG CGCGCTGGAG CAATAGGGCT GACACAGTGG TGGACATCAT CACACGTTCG 
GCTGAAGAGG GATATTCGGT AGGGGTGGAT GGGCTTTCGG CTCTTACTAC AGGTTTTGTA 
GATGCTTCGG CTTATGGTAA CTACACCAAA GGCAAGCATA CGTTGGGAGT GGAATACAAA 
TTGGAGTTTC GCAATTACAA CGACAGATAC TATGAAAAAC ACTCCGATTA TGAACTATCG 
GGTGTGCGTT ATGCAAACGA CCAACAATCA AAATCAGGGT TTAGCTATAA TGCGCACAAC 
GCTTCGGTGC GTTATAGCGC AGTAGTACCA CAAAACTATA GTTTCCAAGC TAAAGCCGGA 
ATGGAACTTT TGAATCGCTC TGCACATAGC AATGGCATAA ACCTATTTAC ACAAGGTACA 
ACCATTAGCC ATCACACATT ATCAGGTAAA AGTCACGACC ACTGGTTGCG CCCCAAAGTA 
GACCTATACT TCTCTAAAAA ATTAGGCAAA CGAGATGAAT TGAGCGTGAA CGCCGTGGGG 
AGTTATTACA ACACTACCAA AGAGAACCTC TCAAAGGAAT GGGAGACCGC AACCCAGCAG 
AATGTGTACG ACGATGATAT GGATTTGAAA GTAAAACAAC GCGGTTGGGT AGGTGAAGTA 
GCACATACTC ATCAGTTTAC TATAGGCAAA CTCAATTCGG GCTACCGTAT TAGCAGTACT 
TTTATCGACA ACGACTTACG TAACTTGGCA GGTACTTCGG CTTACGATGT TACCTATACC 
AATCAGTATT TGTACACCGA GTTTGTAGGC AAAAAAGCTA ATTTTATGTA CAGAGCCAGT 
GCTGGGCTTA CCCACACCCA CAACCGTAGT GCCGAAAACA CTTTTACCGA ATGGGTGTTT 
ACGCCGAAGG TAGTGTTGGG TTATGAACTC GCCAATAACC AGAGTTTGCG CCTCACAAGT 
TACTATGTAC CCCGCAGTCC GCGTAGTGCA GAACTCAGTA GCAATATAGC ACAACAAGCG 
CCGAACATCT TGGAGACAGG AAATCCTTAC CTAAAATCAC AACATATATT TTGGACTGGA 
CTCTCTTATA CTTTCAACAA TGAGTACACC GATTTTAACC TTCAACCCTT CTACAAAAAC 
ACCCAACGAG TAATTACTGA TATTTATATC AAAGACCCCG TACGCAATGG AATACTCAGC 
ACTTATGAAA ACAGTAAATA TCACGAGGAG TTTGGTTTTT CATTAGATGG TACTTTTAAA 
CCATTAAGGA ATGATTTATT TGTATTTTCA GCTAATATAG CCCCTACACG TGAGACTTTG 
GTTACTGATG CTGGACTACG CGCTCGCAAT AATTATATCG ACAACAACCT ATCACTTACT 
TTTACCTATA AAGATTTGAG GGTAGATTAC AGTTTCAACT TCCCTATTTA TTACATAGAC 
GGCAACACTA TGAGCACTTA TGAAAATAAC AATGATATTT TTATAGAATA CCAGTTAGGT 
AGTTGGACAC TTAAAGGTGG TGTGTTTTGG TTAGGAATGC CTTCGGAATA CAAGATGAAG 
AGCAGTTACG AAGGTTTGGT AAACCAGCAT AGCTATACCT ACATAGAGAA CAACCGCAAT 
ATGTTTGTAT TAGGGGTTAG CTACGATTTC TCCAAAGGAA AGAACAATTC GGTAGACAAG 
AAGCTCAACA ACGATACCGC TCCTGCAGCG CAGTTTTAA 

 

Protein sequence

MKLLLTSLLL VYFMTTTAQE VVPETPLDTI VLNEVIVKAQ RKTQYTDKAS FTFEKKAVEQ 
ARYAKDLLRS LPNLHLNPVT NQIATLKRGT LLVLVNGVEA TDLQIRGIAP QNVARIDYYD 
IPPARWSNRA DTVVDIITRS AEEGYSVGVD GLSALTTGFV DASAYGNYTK GKHTLGVEYK 
LEFRNYNDRY YEKHSDYELS GVRYANDQQS KSGFSYNAHN ASVRYSAVVP QNYSFQAKAG 
MELLNRSAHS NGINLFTQGT TISHHTLSGK SHDHWLRPKV DLYFSKKLGK RDELSVNAVG 
SYYNTTKENL SKEWETATQQ NVYDDDMDLK VKQRGWVGEV AHTHQFTIGK LNSGYRISST 
FIDNDLRNLA GTSAYDVTYT NQYLYTEFVG KKANFMYRAS AGLTHTHNRS AENTFTEWVF 
TPKVVLGYEL ANNQSLRLTS YYVPRSPRSA ELSSNIAQQA PNILETGNPY LKSQHIFWTG 
LSYTFNNEYT DFNLQPFYKN TQRVITDIYI KDPVRNGILS TYENSKYHEE FGFSLDGTFK 
PLRNDLFVFS ANIAPTRETL VTDAGLRARN NYIDNNLSLT FTYKDLRVDY SFNFPIYYID 
GNTMSTYENN NDIFIEYQLG SWTLKGGVFW LGMPSEYKMK SSYEGLVNQH SYTYIENNRN 
MFVLGVSYDF SKGKNNSVDK KLNNDTAPAA QF