| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0238 |
|---|
| Symbol | |
|---|
| ID | 8366643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 310706 |
|---|
| End bp | 311218 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644982658 |
|---|
| Product | Peroxiredoxin |
|---|
| Protein accession | YP_003140362 |
|---|
| Protein GI | 256819083 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0386] Glutathione peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATC TACAAGCTCA AAACAACGCT GATAATCAAA CTATTTATCA GTTTACTGTA
GAAGATATCA ATGGCAAACC CTTTGTCCTT GCCGACCTCA AAGGCAAGAA AGTAATGATT
GTTAATACTG CGTCAAAATG CGGTCTCACT CCCCAATACA AAGAGCTTGA AGCCCTCTAT
AAGCAGTATA AAGACAAAGA TTTTGTCATT ATAGGATTCC CCGCTAATAA TTTCTTAGGG
CAAGAACCTG GTAGTAATGA ACAAATTGCT TCATTTTGCA GTATCAACTA TGGAGTAACA
TTCCCGATGA TGAGCAAAAT ATCGGTAAAA GGAAAGAATA TGCACCCTCT ATATCAGTTT
CTTACACAAA AATCAAAGAA CGGAGTAGAA GATTCTAAAG TAAAATGGAA TTTTCAAAAA
TACCTCATTG GCAGAGATGG CAAGTTAGAA AAGGTAATCG ACCCTAAAAC TTTACCATCC
AGTGATGAAG TAATACAATG GATTGAAAAA TAA
|
|---|
| Protein sequence | MENLQAQNNA DNQTIYQFTV EDINGKPFVL ADLKGKKVMI VNTASKCGLT PQYKELEALY
KQYKDKDFVI IGFPANNFLG QEPGSNEQIA SFCSINYGVT FPMMSKISVK GKNMHPLYQF
LTQKSKNGVE DSKVKWNFQK YLIGRDGKLE KVIDPKTLPS SDEVIQWIEK
|
|---|
| |