Gene Coch_0236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0236 
Symbol 
ID8366641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp308627 
End bp309553 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content39% 
IMG OID644982656 
Productglycosyl transferase family 2 
Protein accessionYP_003140360 
Protein GI256819081 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.855087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAA TAGAAATAAT AGTACCGTGT TATAACGAAA GTGAAAATAT ACGTCCGTTA 
TATGAGGCTA TAAAGAGTGT CTTTACTGAA AAACTCTCTG ATTATAGCTA TACTTTGCTT
TTTGTGAACG ACGGCAGCAG CGATAATTCT CTTGAGGTGC TCAAATCTTT AGTTGAAAGT
GATGTGCGCG TGAAATATCT ATCGTTTTCG CGTAACTTTG GTCATCAATT AGCAGTAAAA
GCAGGATTAG ACCACTCGTT TGCTGATGCT GTTATCTCTA TGGATTGCGA TTTGCAACAC
CCTCCTGCCC TTTTACCCGA ACTCATTGCC AAATGGGAAG AAGGCTATCA AGTAGTCGCA
ACTTTGCGTA CCTATCCCGC GGATACCCCT AAAGAGAAAC AAAAAAGCTC TCAACAGTTT
TACAAACTTC TCAATCTGCT TTCGGATATA GAAATCAAAG AAGGTTCAGC TGATTTTAGA
CTCTTAGACC AATCAGTGGT AGAGGTCATT CGCTCGATGA GAGAAAATGA ACCTTTCTTG
CGAGGCATCG TACCTTGGGT AGGATTTCGC CAAACTTATA TCCCTTACAC TGCAGCTTCT
CGTTTTGCAG GTGAAAGTAA ATACACGGTT AAGAAGATGC TACAATTAGC AATTACAGGT
GTTACTGCTT TCAGCATCAA ACCCTTATAT TTCGCTGTAT TTTTAGGCTT TGTATTTTCT
GCCCTATCAC TATTGTACAT TCCTTACGTG ATATACGCCT TTGCAAGTGG TACTGAAATA
TCGGGCTGGG CTTCACTGAT TATGACGATT GTTTTCTTTG GCGGGTTACA ACTCATCATT
TTAGGTATCA TAGGTATTTA CATAGGAAAA ATCTTTAAAC AAACTAAAGA CCGACCTTGT
TATATTATTC AAGAAGAAAA ATTGTAA
 
Protein sequence
MKTIEIIVPC YNESENIRPL YEAIKSVFTE KLSDYSYTLL FVNDGSSDNS LEVLKSLVES 
DVRVKYLSFS RNFGHQLAVK AGLDHSFADA VISMDCDLQH PPALLPELIA KWEEGYQVVA
TLRTYPADTP KEKQKSSQQF YKLLNLLSDI EIKEGSADFR LLDQSVVEVI RSMRENEPFL
RGIVPWVGFR QTYIPYTAAS RFAGESKYTV KKMLQLAITG VTAFSIKPLY FAVFLGFVFS
ALSLLYIPYV IYAFASGTEI SGWASLIMTI VFFGGLQLII LGIIGIYIGK IFKQTKDRPC
YIIQEEKL