| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0216 |
|---|
| Symbol | |
|---|
| ID | 8366621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 280289 |
|---|
| End bp | 281281 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644982636 |
|---|
| Product | dTDP-glucose 4,6-dehydratase |
|---|
| Protein accession | YP_003140340 |
|---|
| Protein GI | 256819061 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
|---|
| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.240285 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA ATATCTTAAT CACAGGAGGA GCTGGATTTA TCGGCTCTCA CGTCGTGAGG
CTATTTGTAA ACAAATACCC CGACTATCAC ATTTTTAACT TAGACAAGCT TACTTACGCT
GGCAACTTAG AGAATGTTGC CGACGTAGCC AATGCCCCTA ACTATACTTT TATACAAGCG
GATATTTGCG ACTACGAGCG TATGAAAGCC CTCTTCGCTG AAAATCACAT TGATGGGATT
ATCCACCTCG CTGCCGAAAG TCACGTGGAT AGAAGTATTG AAGACCCTTT TATCTTCGCG
AAAACAAACG TAATGGGCAC TTTGAGCCTC TTGCAAGCGG CTCGTGAGGC GTGGAAAGAT
AATATGCAAG GCAAACGCTT TTATCACGTC TCTACCGACG AGGTATATGG AGCCTTAGAA
ATAGGCGAAG CACTCTTTAC TGAGCAAACG CCTTACGACC CCCAATCACC GTATTCGGCT
TCTAAAGCTT CCTCTGACCA TTTTGTGAGA GCTTACCATA ACACTTACAA ATTGCCTGTG
GTGATTTCAA ATTGTTCTAA CAACTACGGT TCTCACCAGT ACCCTGAAAA ATTGATACCG
GTGTGTATTT ATAATATTGT AGATAATAAG CCGTTACCTA TCTATGGCAA AGGTGAAAAT
ATTCGCGATT GGCTTTTTGT AGAAGACCAC GCTCGTGCTA TCGATACTAT TTTCCACCAA
GGAAAAGATG GTGATACCTA CAACATTGGG GGCTTTAACG AATGGCGTAA TATCGATTTA
GTGAAAGTAA TCATCAAAGA AGTAGATAAA CAGTTAGGTC GCCCCGAAGG TACTTCCGAA
AAGCTCATCA CTTTCGTAAC CGACCGTGCT GGTCACGACC TCCGTTACGC TATTGATGCT
ACTAAATTGA AAAAAGAACT CGGCTGGGAA CCTTCCTTGC AGTTTGAAGA AGGTATACAG
AAAACCGTAA AATGGTACCT TTCTAATAGA TAA
|
|---|
| Protein sequence | MKRNILITGG AGFIGSHVVR LFVNKYPDYH IFNLDKLTYA GNLENVADVA NAPNYTFIQA
DICDYERMKA LFAENHIDGI IHLAAESHVD RSIEDPFIFA KTNVMGTLSL LQAAREAWKD
NMQGKRFYHV STDEVYGALE IGEALFTEQT PYDPQSPYSA SKASSDHFVR AYHNTYKLPV
VISNCSNNYG SHQYPEKLIP VCIYNIVDNK PLPIYGKGEN IRDWLFVEDH ARAIDTIFHQ
GKDGDTYNIG GFNEWRNIDL VKVIIKEVDK QLGRPEGTSE KLITFVTDRA GHDLRYAIDA
TKLKKELGWE PSLQFEEGIQ KTVKWYLSNR
|
|---|
| |