| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0196 |
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| Symbol | |
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| ID | 8366601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 238667 |
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| End bp | 241771 |
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| Gene Length | 3105 bp |
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| Protein Length | 1034 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644982616 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003140320 |
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| Protein GI | 256819041 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGAA AAATCTTCTT ATTGCTAATA GCTCTATGGA GTACTACCTC TCTGCTATGG
GCACAAAACA AACAAATTTC CGGTACTATT ACCGATGAGA AAGGCACTCC TCTTCCCGGA
GTGAGTGTGC AAATCAAATC AACTACCCGT GGGGTAGCTA CTGATTTTGA TGGTAAATAT
AGCATTGAAG CCTCTCCAGG CAACGTGCTA TTGTTCAGTT TTATGGGCTA TGCCTCCCAA
GAAAAAACCG TTGGCAAGGG GGGGGGTAAT AGCTTGATTA TCAATGTACA GCTGAAAGAA
GATACCCAAG AATTGGGCGA AGTAGTAGTA GTGGGCTATG GTACCCAAAA GAAAGAAAAC
CTTACGGGAG CTGTAGCAGC GGTAGACGCT AAGAAATTAG CCAGCCGTCC GGCAACAAGC
ATTACCAAAG CCTTGCAAGG AAGTGTAGCC GGGGTTACCG TTATCTCTCG TCCTGGAGGT
ACGACTCTTA ACATTCGCGG GCGCGGTAAC TTAGGTAATT CCGACCCTCT CTATATCGTA
GATGGTATAG AGGTAAGTAG CAATTTCTTC AATGCTATGA ATCCTAATAG TATTGAGAAC
ATCTCTTTCT TAAAAGACGC TTCTTCGGCA GCTATCTATG GAGCAAAAGC TGCTTATGGC
GTAGTATTGG TAACTACAAA AGCCGCCAAA ACAGGCGTAA TGCAAATTAG TTATGAAGGT
GCTACAGGAG TACAAATGCC TACCTACTTA CCTAAGATGG TAAATTCAGC TGAATATGCC
GAAATGTATC GCTTAGCCGA ACGCAACACA GGTGTCCCTG AAGCCAACCT TACTTTTACC
GATGAGATGA TACAAAAGTA TCGTGATGGC TCTGACCCCG ACCGCTATCC CAATACCAAT
TGGTTCGACC TCATTGTGCG TAAACAAAGC TTTATTACCA AACACAACGT ACAATTCTCA
GGAGGCGTAG AAAAGTTCAA ATATCTATTA GACGGAGGTT TCTTTAGAGA AGAAGGAGCT
TCAAGAGGTG ATGTAACCGA CCGCTACAAC TTGAACTCCA AAACTTCTTC CGATATTAAA
AAATGGCTTA CCCTTACTTC TAATATTAAT TTCATCTATA CCAAACATAA CAATACTCGC
GGTGGTATTA ACTTTGTAGA GGCTTTACGC GTACCTCCCA CCCAAGTAGC CAAACATTCT
AATGGTGAAT GGGGTACTGT TCGTAACGGG CGACAAACAA CTTCTGAAGA AACCAACGCA
AACCCTTACC GTTCTTGGGC TGAAAATGGC AGAAGTAGTT CTACAGCGCG TCGTCTTTTA
GGTTCTATCG CTGCCGAAGT ACGTCCGTTC GAAAAAGTAA AAGTTACCAA TCAGTTCGCT
TATAGTTATT ATGATTATCG AGGGTTCTCT TTTGCTAACA GAAAGAAAGG TGTACCAAGT
TTCCTAAATC CTGCTTCTGG AATTATTGCA GGTACAGCAT CCACTAATAA CCAAATGGAC
TTAGATTGGT TCTATTCCGA TAAGTTTATC TATGACGGCT GGCTTAACTA CGACCAGACC
TTTAACGACC TACACGCCGT AACCTTAATG ATAGGGGCGC ACACCGATAT CTATTCGTTT
AGGCGTCTTA CCGTAGGACG TAAAAACTTC GCCAGCAATG ATATGAACGA CTTTTCAGGT
GGTTCTTTAA AAGAAGTAGA CCAAATACTC ACAGACACAA AAAATAATAT AAATTATTAC
GAAGAAGAAA GTATCAATTC TTATTTTGGT AGGATAGGTT ACACTTACGA CCAAAAATAC
CTATTCGAAG CCAATTTCCG TGCCGATGCT TCTTCTCGTT TCGCTAAAAA AGGTCGTTGG
GGCTACTTCC CCTCTTTTTC AGTGGGCTGG CGTGTAGACC AAGAGAAGTT TATGGAAAAT
GCCACTTGGC TCGACGGACT CAAATTGCGC GCCTCTTGGG GTGAGAATGG TAATATTAAA
AACATAGGAT TATACGATAC CTATTCTACT TACGATAGTG GAGGTACTAC GGTATTAGGT
GGAGTAAGCG TTCCTACCCT TACCGAAGGA CGTATAGGAA ACCCAGACCT TACTTGGGAA
ACTACTGCTT CCACTAACAT AGGTCTTGAT TTGAGTATTG GTAAAGGGCT CATCAATATC
ACCGCCGACT TATACAACCG CTTAACAAAA GGTATTCTTA TTCGTGCTAA TGATATAATG
GCTGAAACTG GCCTCTCTTC TAGTCAAATA CCTGCACGTA ATGTAGGTAA AGTACGTAAT
AAAGGTATTG AGTTAGTACT CTCTCATTAT AAATCTTTTG GTGACTTCAG TTATAACGTT
TCTTTAAATG GCACTTTTAA CCACAACGAA ATTGTCGACT TAGGTGATAA AGTAGACCAA
TTACCTCCTG AGGATCTTTG GATATACAAA AAAGGAGGTT CTATTGGCGA TTTCTATATG
TATGACTCCA ATGGTCTCTA TACCCCACAA GAGATTACTG ACGGAAAATT TGTGCCTCTG
GGAGAACAAG TCCCTGAAGC TGGTATGATT CGTTATGTAG ACATTAACGG CGATGGAAAA
ATTGATGCCA AAGACCGTAC TGTAGTAGGT AATGATGTCC CTAAATACAC CTATGGAGTA
AACATTGAAC TTAACTACAA AAACTTCTCT TTCTCCATAA TGGGGCAAGG TATTCAAGGC
GTAAAAGTAT ATCTAAGGAA TGAAGCCTCA CAATCATTCT TTGATAACTC TGTACCTCGT
GAGTGGCAAA GAGATAACTG GACAACCGAA AATCAAGGAG CTTCTTATCC TAAACTTTTT
GTCCCTTCTG ATGCTCGTTA TAAATATAAC ACGCAAACTT CATCTTTTTG GTTATTTAAT
GCCGATTATT TCAGAATTAA AAACATAACC CTTGGGTATA CACTACCCGA TGAAGTACAA
AAGATATTAG GAGTAACCAA TGCACGTGTA TATCTTTCAG GTGAAAACCT CTTTACTTTT
AGAGGCGATA AACGTATGAA AGATTTCGAT CCCGAAGTAG CCAGTGGTCG TGGTTATTCA
TTGGTGTTAA AAAGCTATAT CGCTGGCTTG TCTTTTTCTT TCTAA
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| Protein sequence | MKRKIFLLLI ALWSTTSLLW AQNKQISGTI TDEKGTPLPG VSVQIKSTTR GVATDFDGKY
SIEASPGNVL LFSFMGYASQ EKTVGKGGGN SLIINVQLKE DTQELGEVVV VGYGTQKKEN
LTGAVAAVDA KKLASRPATS ITKALQGSVA GVTVISRPGG TTLNIRGRGN LGNSDPLYIV
DGIEVSSNFF NAMNPNSIEN ISFLKDASSA AIYGAKAAYG VVLVTTKAAK TGVMQISYEG
ATGVQMPTYL PKMVNSAEYA EMYRLAERNT GVPEANLTFT DEMIQKYRDG SDPDRYPNTN
WFDLIVRKQS FITKHNVQFS GGVEKFKYLL DGGFFREEGA SRGDVTDRYN LNSKTSSDIK
KWLTLTSNIN FIYTKHNNTR GGINFVEALR VPPTQVAKHS NGEWGTVRNG RQTTSEETNA
NPYRSWAENG RSSSTARRLL GSIAAEVRPF EKVKVTNQFA YSYYDYRGFS FANRKKGVPS
FLNPASGIIA GTASTNNQMD LDWFYSDKFI YDGWLNYDQT FNDLHAVTLM IGAHTDIYSF
RRLTVGRKNF ASNDMNDFSG GSLKEVDQIL TDTKNNINYY EEESINSYFG RIGYTYDQKY
LFEANFRADA SSRFAKKGRW GYFPSFSVGW RVDQEKFMEN ATWLDGLKLR ASWGENGNIK
NIGLYDTYST YDSGGTTVLG GVSVPTLTEG RIGNPDLTWE TTASTNIGLD LSIGKGLINI
TADLYNRLTK GILIRANDIM AETGLSSSQI PARNVGKVRN KGIELVLSHY KSFGDFSYNV
SLNGTFNHNE IVDLGDKVDQ LPPEDLWIYK KGGSIGDFYM YDSNGLYTPQ EITDGKFVPL
GEQVPEAGMI RYVDINGDGK IDAKDRTVVG NDVPKYTYGV NIELNYKNFS FSIMGQGIQG
VKVYLRNEAS QSFFDNSVPR EWQRDNWTTE NQGASYPKLF VPSDARYKYN TQTSSFWLFN
ADYFRIKNIT LGYTLPDEVQ KILGVTNARV YLSGENLFTF RGDKRMKDFD PEVASGRGYS
LVLKSYIAGL SFSF
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