Gene Coch_0168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0168 
Symbol 
ID8366570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp204201 
End bp205388 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content38% 
IMG OID644982585 
Producthypothetical protein 
Protein accessionYP_003140292 
Protein GI256819013 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.143679 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAG TTATTCTTAT AGCAGTAGCA GTGCTAGTAG CACTGACTGT TAGCAATTGT 
GGGAAAGGGG GCGATGACGC TCCTAAGGAA CTAAAAACTA AGATTTACGA GAATTTTGAA
ATTACTGAAG ATGGCTCAAC ATTAGTGAAA TGGCTTACTG ATGAAGAAAC TACCATTGAT
ATGGCAGCAG ACGAGATGCT GAGCAAAGTA ACTGCTATCT CAGATTATGC TTTTGCAGAA
CACCGAGAAA TAACCTCAGT GACTTTGCCC AAAGGCTTAA AGAAAATGGG GAAATGTGCT
TTTAAGAGTT GTTCAAAATT AACTTCTATT GTTATTCCTG AGGGGATAAC AAGCATAGAA
GAGGGTTCTT TTGGGTGGTG TGGAGCCTTA ACTTCGGTTG CTATCCCGGG AAGTGTTACA
AGCGTAGGAT ATGGAGCTTT CTCCCAATGT ACAAATTTAG CCAAAATTAC TATTCCTGAC
AAAGGTTTAG TAACCATAGG AGAGCGCGCT TTTTCGTGCC CTGCCTTAAA ATCGTTTACT
ATCCCTACTA CGGTAACAAG TATAGAGAAA TGGGCTTTTT TTGATTGTCA AAATCTTACT
TCCTTAGTTA TTCCTACTAC TGTAAGAAGC ATAGGAGAGG GTGCTTTTGC AAACTGTAAG
GCTATAACCT CTATAATAAT TCCTAAGGGA ATAACAAAAA TTGAAGATTC TACTTTTATG
AATTGTGAAG CCTTGACCTC GGTTACTATC CCTAATACCG TAACAAGCAT AGGTAGTGGT
GCCTTCAGTT CTTGTAAGTC CTTACCTTCT ATTGCCATTC CTAATACTGT AACAAATATA
GGAGAAAGTG CTTTTAGTTT GTGTTCTGCA TTGAAATCGT TCACCTTCCC CGATAATAAT
AGTATTACTA GCATTGAGGA AAAAACTTTT TTGGCTACCG GTTTAACTTC TATTACTATT
CCTAATACCG TAAAAAGTAT AGGAAATAAT GCTTTTGCTG AATGTCCTGC ATTAAAGTCG
GTTACTTTAA AAGGAGGTAC ACCTCCCACC ATAAACATCG ACAGTTGGCC TGGTACTTTT
AGCGATACTC CGCTTAATGC TATTTATGTG CCTGCTAATA GTGTAGAGAC TTATAAAAAG
GCTGATGGTT GGAACAAATT TGCCGATAAA ATACAAGCTA TTAAATAA
 
Protein sequence
MRKVILIAVA VLVALTVSNC GKGGDDAPKE LKTKIYENFE ITEDGSTLVK WLTDEETTID 
MAADEMLSKV TAISDYAFAE HREITSVTLP KGLKKMGKCA FKSCSKLTSI VIPEGITSIE
EGSFGWCGAL TSVAIPGSVT SVGYGAFSQC TNLAKITIPD KGLVTIGERA FSCPALKSFT
IPTTVTSIEK WAFFDCQNLT SLVIPTTVRS IGEGAFANCK AITSIIIPKG ITKIEDSTFM
NCEALTSVTI PNTVTSIGSG AFSSCKSLPS IAIPNTVTNI GESAFSLCSA LKSFTFPDNN
SITSIEEKTF LATGLTSITI PNTVKSIGNN AFAECPALKS VTLKGGTPPT INIDSWPGTF
SDTPLNAIYV PANSVETYKK ADGWNKFADK IQAIK