| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0124 |
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| Symbol | |
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| ID | 8366526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 142868 |
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| End bp | 144160 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644982543 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003140250 |
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| Protein GI | 256818971 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.638422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACACC TTATCTTAAC ACTTACCGCA TTTATAGCCC TCACTCTCAC CGCGCAAGCG
CAGGCTATCC TTTCTTTGGA GGACTGCTAT CGTCTTACTC GTGAGAATTA CCCCGCCGTC
AAAAAGCTCG ATTTGGTAGC CAAAACCGAA GACTATACCC TTGCCAATGC CAACCGTGCT
TACCTCCCAC AGGTCTCTAT CCTAGGGCAA GCCACTTACC AGTCGGAAGT AACCGACCTC
TCTAAAACCA TTGTAGGAGC ACTCCCACTG CCTCCTAACG TCTCTTTGCC TACCATCGAC
AAGGAGCAAT ACAAGGTGGT GGGCGAGGTA AGCCAACTTC TCTATGGAGG TGGTACGATT
CACAGTCAGA AGGCTATTGC CAAAGCTCAA AGTGCCGTGC AAGCACAAGC GGTCGAAACG
CAGTTATACA CCCTAAAACA ACGTGTGAGT AACCTATATT TTGGGGTACT CCTCATCAAT
GCCCAGTTAT CGCAAAACCG CCTCAATATC GAAACGCTTG AGTCGCAACT TAAGAAGGCG
GAAGTAGCCC TAAAAAACGG CACGACCCTT CCCAGCAATG TAGACGAGCT TAAAGCCGAA
ATCCTCCGCG TGACAATGCA AACCACCGAG TACGAAGCCA CCCAAGCTAC CTATTTGCAA
ATGCTGTCTA CTTTCATAGG CAAAGAGCTC ACCAACGCTT CCCAGCTCGC ACAACCTGCG
CCTCAATCCC AGTCTCAAAG CGTAAGTACC GAAATTTTTC GTCCTGAACT CAAAGGATTT
CAGCTACAGG AATCGTTGCT TAAAGCGCAA GAAAAACAGC TCAGTAGCGA ATATATACCT
AAGCTCAGTG CGTTTTTTCA AGGCGGTTAC GGGCGTCCCA CACTCAATAT GCTCAGCAAC
CAAGCTGATT TCTATTACAT CACGGGGCTC CGTTTGCAGT GGAATCTAAG TCCGCTATAC
AACTTGTCGA GCAAGAGACA TATTTTGCGC CTCAACCGCG AGAGTCTCAC AACCGACCGA
CAAGCCTTTT TACTCAACAC AAAACTCGAA CTCACCCAAC AGTCTGAGCA ACTCAAAAAG
CTGCAAAAGC TCATAGAACA AGATGAAGCA TCGGTAACTT TGCGCCACTC TGTCGCTAAA
GCAGCCGAAG TACAATTAGA CAACGGGGTT ATCACCACTC ACGAATACTT GCAGAAAGTC
AATGCTTGGC ATCTCGCTCA GCAAACCCTT ATCCTGCACC AAATACAACT CCTCCAAGCT
CAAGAGAACC ATCAATTAAT TACAGGAAAA TGA
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| Protein sequence | MKHLILTLTA FIALTLTAQA QAILSLEDCY RLTRENYPAV KKLDLVAKTE DYTLANANRA
YLPQVSILGQ ATYQSEVTDL SKTIVGALPL PPNVSLPTID KEQYKVVGEV SQLLYGGGTI
HSQKAIAKAQ SAVQAQAVET QLYTLKQRVS NLYFGVLLIN AQLSQNRLNI ETLESQLKKA
EVALKNGTTL PSNVDELKAE ILRVTMQTTE YEATQATYLQ MLSTFIGKEL TNASQLAQPA
PQSQSQSVST EIFRPELKGF QLQESLLKAQ EKQLSSEYIP KLSAFFQGGY GRPTLNMLSN
QADFYYITGL RLQWNLSPLY NLSSKRHILR LNRESLTTDR QAFLLNTKLE LTQQSEQLKK
LQKLIEQDEA SVTLRHSVAK AAEVQLDNGV ITTHEYLQKV NAWHLAQQTL ILHQIQLLQA
QENHQLITGK
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