Gene Coch_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0116 
Symbol 
ID8366518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp137681 
End bp138436 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content42% 
IMG OID644982535 
ProductMethyltransferase type 11 
Protein accessionYP_003140242 
Protein GI256818963 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCTA TAAACTATCA GAAAATAAAC CAACAGACTA TCAATAACTG GATTGATAAT 
GGTTGGGAGT GGGGGCAACC TATCTCCCAT ACCGAATTTG AGGAAGCTAA AAACGGTAAT
TTTGCCGTCA AACTCACCCC AACTAAAAGT GTACCTAAGA ATTGGATAGG CGACTTGCGT
GGCAAAAAAG TGTTAGGGCT CGCCAGCGGT GGCGGTCAGC AAATGCCCAT TTTCACCGCT
TTAGGTGCAG AATGTACCGT ATTAGACTAT TCCGATAGGC AAATAGAACA AGAGAGAATG
GTTGCCCAAC GTGAGGGGTA CCTCATTACA CTTCTACAAG AAGATATGAG CAAACCCCTT
CCTTTCTCCG ACGATACCTT TGATATGATA TTTCACCCTG TGTCTAATTG TTATATTGAA
AAGGTAAAAC CGCTCTGGAA AGAGTGCTAC CGTGTGCTTA AAAAAGGAGG CGTACTGCTT
TCAGGTTTGG ACATAGGTAT TAATTATCTA TTTGATGAGG AAGAAAAAAC ACTGATAAAT
ACCCTTCCCT TCAACCCATT AAATAACGAA GAACACCTAC GCCAGATGCA GAAAAGCAAT
GGTGGTATAC AGTTTTCACA CACCTTAGAA GAGCAAATTA ACGGACAGTT AGAGGCGGGA
TTCACGCTCT TAAGCCTTTA TGACGATACC AATGGCTATG GTAACCTACA CGAACACAAC
GTCGCAAGCT ATATTGCTAC AAGAAGTATC AAGTAA
 
Protein sequence
MNPINYQKIN QQTINNWIDN GWEWGQPISH TEFEEAKNGN FAVKLTPTKS VPKNWIGDLR 
GKKVLGLASG GGQQMPIFTA LGAECTVLDY SDRQIEQERM VAQREGYLIT LLQEDMSKPL
PFSDDTFDMI FHPVSNCYIE KVKPLWKECY RVLKKGGVLL SGLDIGINYL FDEEEKTLIN
TLPFNPLNNE EHLRQMQKSN GGIQFSHTLE EQINGQLEAG FTLLSLYDDT NGYGNLHEHN
VASYIATRSI K