Gene Coch_0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0055 
Symbol 
ID8366457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp72152 
End bp72823 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content40% 
IMG OID644982474 
ProductGTP cyclohydrolase I 
Protein accessionYP_003140181 
Protein GI256818902 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA ATCAAGAAGA AGATATATTA GGAGATAACC ATATAGCAAC TTCGGCAGTT 
ACACCACTCA GAGCAGATGC TTTTCAGATG AGTGAAACCG AAAAAATAGC AGAAATAGAA 
ACTCACGTAC GTGCTATTTT ACATACTTTG GGAATGGATT TAACCGATGA TAGTTTGAAA 
GGCACTCCCA AGCGTGTAGC TAAGATGTTT GTAAAAGAGA TTTTTGGAGG CTTATTACCA 
GAGCGCAAAC CTTCGATGTC TACTTTTGAG AACTCTTACC ATTATGGTGA GATGTTGGTA 
GAGAAGAATA TCGTGGTGTA TTCCACTTGT GAACACCACT TGTTACCTAT TGTAGGGCGT 
GCTCACGTGG GCTATATTTC TAACGGTAAA GTGTTAGGGC TTTCGAAGAT GAATCGTATT 
GTAGAGTACT ATGCGAAACG TCCGCAAGTG CAGGAACGCC TTACTATGCA AATAGTACAA 
GAGATGCAAC GCGCTCTCGG CACCGAAGAT GTGGCTTGTA TTATAGATGC CAAACACCTA 
TGTGTGAACT CTCGCGGTAT AGAAGATATT GATAGCAGTA CGGTTACTGC TGAGTTTGGA 
GGTAAATTCA AAGACCCTGA GGTAAGAAAG GAGTTCTTAG AATATATCAA ATTAGACACG 
AGATTCCATT AA
 
Protein sequence
MNKNQEEDIL GDNHIATSAV TPLRADAFQM SETEKIAEIE THVRAILHTL GMDLTDDSLK 
GTPKRVAKMF VKEIFGGLLP ERKPSMSTFE NSYHYGEMLV EKNIVVYSTC EHHLLPIVGR 
AHVGYISNGK VLGLSKMNRI VEYYAKRPQV QERLTMQIVQ EMQRALGTED VACIIDAKHL 
CVNSRGIEDI DSSTVTAEFG GKFKDPEVRK EFLEYIKLDT RFH