Gene Cyan8802_3887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_3887 
Symbol 
ID8393237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp3997203 
End bp3998564 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content59% 
IMG OID644981812 
ProductChloride channel core 
Protein accessionYP_003139526 
Protein GI257061638 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.407099 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAATA GCAATTTACT ACGTCTGTTT ACAGGAATCG GCAGATGGGC GATCGGTGGT 
TCGCTTGGAG GGTTGGTCGG CTCCCTGACG GCGGTGATGC TAACTCAGGC GATCAAGCAA
GTTCTCGATT TCGTCTCCGG CCTAGGTACT CTCTGGATGC TGCTCTTGCC ACTGTTCGGC
ATTACGTTAG CGGTACTGGT ACTGAATGTC ATCGGTAAGG GCGTGCCCGT ACAAACATTA
GCTCCGCTTC AGGACGAAAA TCTTGATCGG CCTCCTAAAC TGACCTGGTA CACTTTCCCT
CATGATGTCG CTCGAGCCGA TCTGACGGGT GACGTGGTAA ATACGGCCGG AGCGGAGGAG
CGGTTTCCTT GGAAGCGTGC ACCGTTGCGC GCCCTCGCTA TCTTGTCTAC GGTCGGGTTG
GGAGCGGCGA TGGGAACCGA ATCCCCGGCA GCCCATATCG GCGTAGCGAC AGGAGTCTGG
TTAAGTAGCC GAAATCCAGC ACTAGGCTGG CTGGTACGTC CCGCCGCAAT CGGTGGTGGT
GCGGCGGCGG TGTCAGCCTT AATGGGTATT CCTCTGGTGG GTAGCTTCTT CATGTTCGAG
TTGGGTCGGC GGCGAAAAAT TCCCCTTACC CCGGAACGGG CAGCAGCGAT GTTAACGGGG
GGACTGATGG GTTGGGGGGT AAACGTTGTC TTCAACCTCA GTCTGATCCG GCTGGTCGTA
CCTAGGGTTC CCCCTGCTGA CTTGTGGGAG GCGGTGACGG CGGCGTTGTT CATCGGAGCC
CTCGCGGGTG TTATTACATC GCTATCGGGT GAGGCGATCT ACTGGGCTAG AGGCTTACAG
ACCCGTCCGG CCGTTCGTCT GCTGTTGGGG GGTCTGGCCA TGGTGGTGCT GGCACTCGTG
ATAGCACAAA TCGCTTCTCC GGGGGCGGCT TTCGGTCCGG GTGGAGCAGC CATTGTCTGG
GCCGAAACCG TTGATCCATC CCCTTACCAC TTGCTGGCTG TATCCTTGCT CCGAGCGGCA
TTCACCACGG CGGCAGTCGT AGCGGGGGGG TGTGGTGGAG TGTTTGTCCC TTTCCTAGCG
ATCGGTGACT TGGGTGGCCG GGTGTTCGCG GCGGCTTTCG GGGTACCATC GGATCTGGCA
GGGGCGGCCG GAGCGGCGGC AGGTATCGCC GGTGGCTATC GGCTACCTCT GACAGCCATG
GCGATGGTGC TAGGGGTCGG TGGTCCGACA GGTGCGACGC TAACTTGCCT CGCGACGGTT
GGGGTTGCTA CTCTTTCGGG ATTGATAGCC GCGCGGACGG CCGATAAACT CTCTGATTCC
TTACGGGAGG CGATGGGAAA GAATCCATCG TCGGAGGATT AA
 
Protein sequence
MANSNLLRLF TGIGRWAIGG SLGGLVGSLT AVMLTQAIKQ VLDFVSGLGT LWMLLLPLFG 
ITLAVLVLNV IGKGVPVQTL APLQDENLDR PPKLTWYTFP HDVARADLTG DVVNTAGAEE
RFPWKRAPLR ALAILSTVGL GAAMGTESPA AHIGVATGVW LSSRNPALGW LVRPAAIGGG
AAAVSALMGI PLVGSFFMFE LGRRRKIPLT PERAAAMLTG GLMGWGVNVV FNLSLIRLVV
PRVPPADLWE AVTAALFIGA LAGVITSLSG EAIYWARGLQ TRPAVRLLLG GLAMVVLALV
IAQIASPGAA FGPGGAAIVW AETVDPSPYH LLAVSLLRAA FTTAAVVAGG CGGVFVPFLA
IGDLGGRVFA AAFGVPSDLA GAAGAAAGIA GGYRLPLTAM AMVLGVGGPT GATLTCLATV
GVATLSGLIA ARTADKLSDS LREAMGKNPS SED