Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_3682 |
Symbol | |
ID | 8393024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 3759442 |
End bp | 3762066 |
Gene Length | 2625 bp |
Protein Length | 874 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644981607 |
Product | DNA polymerase III subunit alpha |
Protein accession | YP_003139329 |
Protein GI | 257061441 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) [TIGR01445] intein N-terminal splicing region |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.362078 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTTTG TTGGCTTACA TATCCACAGT GATTATAGTT TACTCGATGG AGCATCTCAA TTAAATGCTT TAGTTGATCG CGCGGTAGAA TTAGAAATGC CAGCGATCGC TTTAACGGAT CATGGGGTGA TGTATGGGGC GATCGAATTA ATGAAGGTTT GCCGTAATAA AGGAATTAAA CCTATTATTG GCAATGAAAT GTATGTGATT AATGAAGATA TTGAGGTCAA TAAACGGCAT CGAAAATATC ATCAAGTTGT TTTAGCAAAA AATACCCAAG GCTATAAAAA TCTAGTTAAA CTAACAACTA TTTCCCATCT TAAAGGGATT CAAGGAAAGG GGATTTTTGC CCGTCCTTGT ATTAATAAAG AATTACTGAC CCAATACCAT GAAGGCTTGA TTGTTACCAG TGCTTGTTTA GGGGGAGAAG TGCCCCAATC GATTTTAGCA GGGGATACTA AACAAGCGAA AACCGTGGCA AAATGGTATC AAAAACTCTT CAAGGATGAC TATTATTTAG AAATTCAAGA TCATGGATCA CAAGAAGATC GAATTGTCAA TAGAGAATTA GTAAAAATTG CCCGTGATTT AGGCATAAAA ATTATTGCAA CCAATGACTC TCATTTTATT TCCTGTTATG ATGTAGAAGC CCATGATGCC CTACTTTGTA TTCAAACCGG TAAACTAATT ACTGAAGATA AACGGCTCAG ATATAGTGGG ACTGAATATC TCAAATCCGC CGAAGAAATG GCGTTATTAT TTCGCGATCA TCTCCCTGAT GATGTTATTG AAGAAGCGAT TAACAATACC CTCGAAGTTG CAGATAAAAT TGAGCCTTAC AAGAACATTT TTGGAGAGCC TCGCATTCCT AATTATCCCG TTCCTTCGGG ACATACTCCC GATAGTTATG TTGAAGAAAT TGCTTGGGAA GGGTTGCTTG AAAGGCTAAA ATGTCGCTCC CGTGGGGAAA TTTCAGACGT TTATAAAGAA CGGCTAGAAT ATGAATTAAA AATGCTCCAA AGGATGGGCT TTTCTACTTA TTTTTTAGTC GTTTGGGATT ATATTAAATA TGCGAGGGAT AATGGTATTC CCGTAGGACC CGGACGCGGT TCTGCTGCGG GTTCTTTAGT TGCCTATTGT TTAAAAATAA CCAATATTGA TCCCGTGCAT CACGGACTTT TATTTGAAAG ATTTTTGAAT CCTGAACGTA AATCTATGCC TGATGTTGAT ACAGATTTTT GTATTGAAAG ACGGGATGAA ATGATTAAGT ATGTCACAGA AAAATACGGA GAAGCGAATG TCGCTCAAAT TATTACCTTT AACCGCATGA CTTCCAAAGC AGTCTTAAAA GATGTGGCTA GGGTATTAGA TATTCCCTAT TCAGAGTCAG ATAAAATGGC AAAAATGATT CCTGTTTCAC GGGGCAAACC AACTAAATTA AAAGTCATGA TTTCTGATGA AACTCCCTGT CCTGAATTTA AGGAAAGATA CGATAATGAT CCTCAAGTTC GTCGCTGGTT AGATATGGCA ATTCGTATTG AAGGGACTAA CAAAACCTTC GGGGTTCATG CAGCAGGAGT CGTTATTTCT TCTGAACCAC TAGATGAAAT TGTCCCGCTA CAAAAAAATA ATGAAGGTTC TGTTATTACT CAATATTTCA TGGAAGATTT AGAGTCCCTT GGACTGCTAA AAATGGACTT TTTGGGTTTA AGAAATTTAA CGACTATTCA AAAAACAGCA GAGTTAATTA AACAAAATAG AAAGGTTGAA TTAGACTTAG ATCAATTACC CTTAGAAGAA AGAAAGGCCT TACAAATCAT TGCGAAAGGA ACAGCCAAAA AGCTACCTGA AGATATACAA AAAACCCATA AATTACTTGA AAGAGGTGAT TTAGAAGGGA TTTTTCAGCT AGAATCATCG GGAATGAAAC AGATAGTTAA AGATCTAAAA CCATCAGGAA TTGAAGATAT TTCTTCTATC TTAGCACTCT ATCGTCCAGG TCCTTTAGAT GCGGGACTCA TTCCTAAATT TATTAACCGT AAACATGGAC AAGAACCGAT TAAATATGAA CATCGTTTAT TAGAACCCAT TTTAAAAGAA ACCTACGCTG TTTTGGTGTA TCAAGAACAA ATCATGAAAA TGGCACAAGA TTTAGCAGGG TATTCTTTAG GAGAAGCGGA CTTATTACGT CGCGCAATGG GTAAGAAAAA AATCTCCGAA ATGGAAAAGC ATCGGGAAAA ATTTATTGAA GGTGCAGCGA AAAATGGAGT GATCAAAGAA ATTGCTGAAA ATTTGTTTAC CCAAATGGTT CAATTTGCTG AGTATTGTTT GAGTTACGAT ACAGAAATTT TAACTGTTGA ATATGGAGCA ATTCCTATCG GTAAAGTCGT CGAAGAAAAT ATTGATTGTA CAGTGTATAC GGTGGATAAA AATGGCTTTG TTTATACACA AAATATTGCT CAATGGCATT TAAGAGGTCA ACAAGAAGTG TTTGAATATT ATTTAGATGA CGGGTCAATT CTTCGAGCAA CGAAAGATCA TCAATTTATG ACTCTAGAAG GAGAAATGCT ACCCATTCAT GAGATTTTTG AAAGAGGGTT AGAACTGAAA AAAATTAAAA TCTAA
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Protein sequence | MSFVGLHIHS DYSLLDGASQ LNALVDRAVE LEMPAIALTD HGVMYGAIEL MKVCRNKGIK PIIGNEMYVI NEDIEVNKRH RKYHQVVLAK NTQGYKNLVK LTTISHLKGI QGKGIFARPC INKELLTQYH EGLIVTSACL GGEVPQSILA GDTKQAKTVA KWYQKLFKDD YYLEIQDHGS QEDRIVNREL VKIARDLGIK IIATNDSHFI SCYDVEAHDA LLCIQTGKLI TEDKRLRYSG TEYLKSAEEM ALLFRDHLPD DVIEEAINNT LEVADKIEPY KNIFGEPRIP NYPVPSGHTP DSYVEEIAWE GLLERLKCRS RGEISDVYKE RLEYELKMLQ RMGFSTYFLV VWDYIKYARD NGIPVGPGRG SAAGSLVAYC LKITNIDPVH HGLLFERFLN PERKSMPDVD TDFCIERRDE MIKYVTEKYG EANVAQIITF NRMTSKAVLK DVARVLDIPY SESDKMAKMI PVSRGKPTKL KVMISDETPC PEFKERYDND PQVRRWLDMA IRIEGTNKTF GVHAAGVVIS SEPLDEIVPL QKNNEGSVIT QYFMEDLESL GLLKMDFLGL RNLTTIQKTA ELIKQNRKVE LDLDQLPLEE RKALQIIAKG TAKKLPEDIQ KTHKLLERGD LEGIFQLESS GMKQIVKDLK PSGIEDISSI LALYRPGPLD AGLIPKFINR KHGQEPIKYE HRLLEPILKE TYAVLVYQEQ IMKMAQDLAG YSLGEADLLR RAMGKKKISE MEKHREKFIE GAAKNGVIKE IAENLFTQMV QFAEYCLSYD TEILTVEYGA IPIGKVVEEN IDCTVYTVDK NGFVYTQNIA QWHLRGQQEV FEYYLDDGSI LRATKDHQFM TLEGEMLPIH EIFERGLELK KIKI
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