Gene Cyan8802_2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_2548 
Symbol 
ID8391874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp2576963 
End bp2578036 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content37% 
IMG OID644980512 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003138248 
Protein GI257060360 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.211068 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTCAG CAACATCCTC TAACGGTAAC AATGAACAAC CCTATTTTCC CTTGTTATTA 
ATTACGGGTG CATCGGGATT TTTAGGGCAA TATGTAGTCG CAGAAGCATT ACGCTGTAAC
TATCGGGTTC GTGCCATGAC TCGTCTTAAA TCTCAAGATT TAGTTTTTCC TTGGCAAGAT
CATGATGCTG TAGAATGGTT TCAAGGGGAT TTAACCGAAC CAGATACTAT TCAAAAAGCT
TTGGAAGGAG TTACCGCAGT CATTCATTTA GCAGCCGTGA AAATGGGTGA TTATCAACAA
CAATTCTTAG GGACGGTTAA AGCAACCGAA AATTTGTTAA CAGCGATGAG GAAAGCTGAT
ATCAAGCGAT TAATTGCAGT TAGTAGTTTC TCCGTTTTTG ACTATTTATC CCCTGACTCA
AATACCGTAA TTGATGAAAT TTCAGCGTTA GAAACTTGTC CTCAAAATCG AGATCTTTAT
GCTCAGATGA AATTGTTACA AGAGCAAAAA ATCCGAGAAT TTGAGCAAAC TGATGGGGGA
GAAATTACTA TTTTACGACC GGGAATGATT TATGGTCGTT CTCACTGGTG GAATGCTCGT
TTGGGGATTA AATTGAGCAA TCGCTTTAGT ATTACAATCG GAGGAAAAGC TATTATTCCT
CTTATTTATG TTGAAAATTG CGCTCAAGCA ATTATTGTAG CCGTTAAAGA AAAAGCTGCC
ATTGGTCAAA TCTTTAATCT GGTGGATAAT GACTTACCAA CTCAAGAAAC TTACTTAAAA
GCTATTACTA AATACATGAC AGTTACTCCC TCTTATCTGT CGATTAGTTG GGGATTAATA
GCATTAATAG CTAATCTAGG TTGGTTAATT AATCAGCATC TGTTTAAGGG AAAAATCAAG
TTACCTGGGT TGTTAATTCC TGCGAGGCTT TATGCGCGTT TTAAACCCTT TAACTATAAT
AATAATAATG CCAAAAAAGT GTTGAATTGG AACCCTCGAT ATTCTTTAGA TCAGTCCTTA
GAAAGAAGTT TTAGTTCTCA AAATTTATTA TCTGTTGATC AACAAGTCGA GTAA
 
Protein sequence
MESATSSNGN NEQPYFPLLL ITGASGFLGQ YVVAEALRCN YRVRAMTRLK SQDLVFPWQD 
HDAVEWFQGD LTEPDTIQKA LEGVTAVIHL AAVKMGDYQQ QFLGTVKATE NLLTAMRKAD
IKRLIAVSSF SVFDYLSPDS NTVIDEISAL ETCPQNRDLY AQMKLLQEQK IREFEQTDGG
EITILRPGMI YGRSHWWNAR LGIKLSNRFS ITIGGKAIIP LIYVENCAQA IIVAVKEKAA
IGQIFNLVDN DLPTQETYLK AITKYMTVTP SYLSISWGLI ALIANLGWLI NQHLFKGKIK
LPGLLIPARL YARFKPFNYN NNNAKKVLNW NPRYSLDQSL ERSFSSQNLL SVDQQVE