Gene Svir_39610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_39610 
Symbol 
ID8389282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4288089 
End bp4288598 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content65% 
IMG OID644977970 
ProductADP-ribose pyrophosphatase 
Protein accessionYP_003135729 
Protein GI257057897 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGGAT CGGCAGGTCG CTCCGGCGAC CCGAACCCGG GACGTCGGAG GCGACGCCGG 
CGTCGGACAC GGCTGACCAC CGTCAAGGAG ACGTCCGCAG GCGGACTTGT CGTGGACCCC
TCCAGACGCC ACGCGGTGTT GATCGGCAGG CTGGACCGGC ACGGGCACCT GTTGTGGTCT
CTGCCGAAAG GACACATCGA GACCGGTGAG ACCACGGAGC AGACCGCGGT GCGCGAGGTG
AAGGAGGAGA CCGGGATTTC CGCGCACGTA CTGCGAAAGC TCGGCACGAT CGACTACTGG
TTCGTCGCCG AACGACGTCG GGTGCACAAA ACCGTCCACC ATTTCCTGCT CGAGGCCGAT
GGTGGTGAAC TCTCCGACGA AGACGTCGAG GTGACCGAGG TCGCATGGGT GCCGTTGGCC
GAACTCGAGT CCAGACTCGC CTACGCGGAC GAGCGGAAGT TGGTGCGCAG AGCGTTCGAA
TTCCTCGACG CGGACCAAGA GGCTGACTGA
 
Protein sequence
MPGSAGRSGD PNPGRRRRRR RRTRLTTVKE TSAGGLVVDP SRRHAVLIGR LDRHGHLLWS 
LPKGHIETGE TTEQTAVREV KEETGISAHV LRKLGTIDYW FVAERRRVHK TVHHFLLEAD
GGELSDEDVE VTEVAWVPLA ELESRLAYAD ERKLVRRAFE FLDADQEAD