| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_39490 |
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| Symbol | |
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| ID | 8389270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 4272521 |
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| End bp | 4273732 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644977959 |
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| Product | predicted permease |
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| Protein accession | YP_003135718 |
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| Protein GI | 257057886 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0628] Predicted permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.233759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.317185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCCGAGG AGGCGGACGT CGTCGGCTGG GTACCCACGG GACTACGGGT GTGCGCCGCC
CTGTCCTGGC GTTTCCTCGT CGTGGTGGCG GCGATCTACG TCGTGGTCTG GCTCGTCGGC
TACCTGTCTT TCGTGGTGGT GCCGGTGGCC ATCGCCCTGC TGCTGGCCGC CCTCCTCGCA
CCCGCCGTGC AGCAACTGGT GAAGTACCGC ATTCCGCAGC CCGTGGCCGC GGCGATCGTG
CTGATCGGCG GCCTCGGCAT CGTCGGCGCC CTGTTGACGT TCGTGATCAC CCAGTTCACC
GCGGGCCTGC CCGCCCTGCA GGAGAAGGTG AACAGCAGTC TCGACCGGGT CAACGACTGG
CTCATCAACG GGCCGTTGCA CCTGCGCGAG ACCCAGATCG TCGACTTCGT CAACAACGCC
GTCGACTTCC TCCAGGAGAA CCAGGCCGCC ATCGCCGACA GCGCTCTGTC CACAGCGGGC
GCCGTCGGGG AGATCCTCAC CGGACTCCTG CTGACGCTGG TCGTCCTCGT CTTCTTCCTG
GCACACGGCC AGCAGATCTG GAACTTCCTG ATCCGTGGCG TGCCGGCACC CGTGCGCAAA
CGGGTGGACC TCGCCGGGCG TCGCGGTTTC GCGTCGCTCG TCAGTTATGT GCGAGCCACG
GCGGCGGTCG CCGTGGTGGA CGGCGTGGGT ATCGGCATCG GCCTGTGGAT CGTCGGCGTG
CCGCTGGCCA TCCCCCTGGC CACACTGGTG TTCCTCGGGG CCTTCATCCC CATCATCGGA
GCCGTCGTCA CCGGGGCGGT CGCCGTGCTG GTCGCGCTGG TGACCAACGG GTTCGTCACC
GCGCTCATCG TGCTCGCCAT CGTGGTGGGC GTCATGCAGC TCGAAGGCAA CGTGTTGCAA
CCGCTGCTGC TGGGGCGGGC CGTGCGACTG CATCCACTGG CCGTCATCCT CGCCATCACG
GCGGGGATGA CCACCGCGGG CATCACCGGT GCGCTGTTGT CGGTGCCGTT GCTCGCCGTG
TTGAACTCCG GCATCAAATC ACTGGCCCAA GAGGCGTCCG AGGGCGACGC CGAGCCGGAG
GCCACCACAG CCCCGGCCAA GCGGACGTCC CCGACCACCC CGGTGTCCGA TACCGACGGT
GACGACGACA GCCTCGACGA GCCGCCGTCG AACGGCTCGG ACTCAGCTCG CAAGGAGCCA
GACCCGGCAT GA
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| Protein sequence | MSEEADVVGW VPTGLRVCAA LSWRFLVVVA AIYVVVWLVG YLSFVVVPVA IALLLAALLA
PAVQQLVKYR IPQPVAAAIV LIGGLGIVGA LLTFVITQFT AGLPALQEKV NSSLDRVNDW
LINGPLHLRE TQIVDFVNNA VDFLQENQAA IADSALSTAG AVGEILTGLL LTLVVLVFFL
AHGQQIWNFL IRGVPAPVRK RVDLAGRRGF ASLVSYVRAT AAVAVVDGVG IGIGLWIVGV
PLAIPLATLV FLGAFIPIIG AVVTGAVAVL VALVTNGFVT ALIVLAIVVG VMQLEGNVLQ
PLLLGRAVRL HPLAVILAIT AGMTTAGITG ALLSVPLLAV LNSGIKSLAQ EASEGDAEPE
ATTAPAKRTS PTTPVSDTDG DDDSLDEPPS NGSDSARKEP DPA
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