| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_39360 |
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| Symbol | |
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| ID | 8389257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 4261693 |
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| End bp | 4262463 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644977946 |
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| Product | Endonuclease IV |
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| Protein accession | YP_003135705 |
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| Protein GI | 257057873 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.548212 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATCG GCGCGCATGT CCATGCGGAC GACCCCCTGT CCGCCGCTCG CGAACGGGCC
GCGGATTCCG TACAGTTCTT CCTTTCCGAT CCGCAGGGCT GGAAGAAGCC GCAACCACAT
CCCCAGGCGA CCGAACTCGC CGACGCCGGC ATCGACGTCT ACATCCACGC GCCGTACGTG
CTCAACGTGG CGTCACTGAA CAACCGCATC CGCATCCCCT CCCGCAAGGT GCTGGGTCAG
CACACCGCCG CGGCGGCCGA GACGGGGGCG AGGGGCCTCG TCGTGCACGG CGGCCACGTA
CGGCAAGGGG AGGACCCCGC GGAAGGGCTG GCCAATTGGC GCAAGCTGTT CGAACGGCGC
GGTGAACAGG GCGACTTCGA GGTGCCGCTG CTGATCGAGA ACACCGCCGG TGGGGCGAGC
GCGATGGCCC GAGACCTGGA CATGATCGCG AGGCTGTGGG ACGAGGTCGC CGACTTCGGT
GTCGGCTTCT GTCTGGACAC CTGTCACGCG TACGCCGCGG GCTGGGACCT GGCCGAGACG
GTGGAACGCG TGCGGGCGAT CACCGGTCGG ATCGACCTCG TACACCTCAA CAACTCCCGG
GACCCCCACG GCTCCCAACG CGATCGCCAC GCGAACGTCG TCGGTGAGGC GGGGACCATC
GACACCGAAC TACTCGTCGC GGTGGCGCGG GAGGCCGCGG CCCCGGTGAT CGTGGAGACA
CCGCCCGACG GTCAGGCCAC CGACATCGAG TTCCTGCGCG CGCGACTCTG A
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| Protein sequence | MQIGAHVHAD DPLSAARERA ADSVQFFLSD PQGWKKPQPH PQATELADAG IDVYIHAPYV
LNVASLNNRI RIPSRKVLGQ HTAAAAETGA RGLVVHGGHV RQGEDPAEGL ANWRKLFERR
GEQGDFEVPL LIENTAGGAS AMARDLDMIA RLWDEVADFG VGFCLDTCHA YAAGWDLAET
VERVRAITGR IDLVHLNNSR DPHGSQRDRH ANVVGEAGTI DTELLVAVAR EAAAPVIVET
PPDGQATDIE FLRARL
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