| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_39180 |
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| Symbol | |
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| ID | 8389239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 4241506 |
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| End bp | 4242231 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644977928 |
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| Product | ABC-type antimicrobial peptide transport system, ATPase component |
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| Protein accession | YP_003135687 |
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| Protein GI | 257057855 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.602292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.126496 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGCTGT GCATGCGTTC GCAGACAGAG ACTCAAGCCC TCGGTGCGTC CACCGGGAGC
GGTGTTCCGC CCGTGCTCGT CGGGCGCGGA CTGATCAAGA CCTACGACAC CCAGCGAGCG
CTCGACGGAG TGAGTATCGA GATCGCCCGC GGTGAGGCCG TGGCGATCGT CGGACCGTCG
GGCTCGGGCA AGAGCACCTT GCTGCACGTC CTCGCGGGCA TCCTCCCCGC CGACGAGGGT
GAGGTGTTCC TGGCCGGGCA ACGGATCGAC AGGCTCGGCG AGACCCGTCG CAGCAAACTG
CGACGTGACG AGTTCGGGTT CGTGTTCCAG TCGGGCATGC TCGTCTCCGA ACTGACCGCC
CAGGAGAACG CGGCGCTGCC GCTGTTGCTC GGCGGGACGT CGCGCCGGAA GGCGATGGCC
ACCGCGGCCG AATGGCTGTC GAGGATGGGA CTTGAGGGCA AGGAGAAGCG GCTGCCGGGG
CAGCTGTCCG GGGGTGAGGC CCAGCGGGTG GCCATCGCGC GGGCACTCGG GCACCGGCCG
AGCGTCATCT TCGCCGACGA GCCCACCGGC GCACTCGACA GTCGCACGGG TGCGGAGACC
ATGCGGGCGC TGCTCGACGC GGCGGCGGAG ACCGACGCCG CGGTCGTGGT CGTCACCCAC
GATCGGGAGC TGGCGGCGTC GATGCCGCGG ATGGTGTCCA TGCGCGACGG CAGGGTGCAG
TTGTGA
|
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| Protein sequence | MLLCMRSQTE TQALGASTGS GVPPVLVGRG LIKTYDTQRA LDGVSIEIAR GEAVAIVGPS
GSGKSTLLHV LAGILPADEG EVFLAGQRID RLGETRRSKL RRDEFGFVFQ SGMLVSELTA
QENAALPLLL GGTSRRKAMA TAAEWLSRMG LEGKEKRLPG QLSGGEAQRV AIARALGHRP
SVIFADEPTG ALDSRTGAET MRALLDAAAE TDAAVVVVTH DRELAASMPR MVSMRDGRVQ
L
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