Gene Svir_39140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_39140 
Symbol 
ID8389235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4236960 
End bp4237727 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content66% 
IMG OID644977924 
Producthypothetical protein 
Protein accessionYP_003135683 
Protein GI257057851 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.405828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTGC TCGCGGTCGA ACGCATCAAG TTGCTCACCA CCCGCTCACC GTGGTGGTGC 
GCGATCGTCT GCATCGTGCT GACAAGCGCT TTCACGGCGC TCATCGTCGG CAACACCCCG
GAGGACGTAT TCCCGGTTTC CGTCGCCATG ACGCAGTACA GCTACACGAT CGGGCTCGCC
GTCATCATGG TGCTCGGTGC GCTGGCGGTG ACGACCGAGT ACCGCTTCGG CACCATCCGC
ACCACGTTCC AAGCGGCGCC CAATCGGACC GCGGCGCTGC TGGCCAAGGC CACCGTGGTC
GCTGTACTCG CGTTGCTCAT CGGGGAGCTC ACCGCCTTCA CCTCGTGGGG TGTCTCGCTG
CTGCTCGCGC CCGAGGCCGA CCTGGCGCTC GACAGCGCCG CCGACGTCAT CAACGTCGCC
GGTGTCGGGA TCATCTACGC GCTGTCGGCG GTGATCGCCG TGGCGGTGGG CGCGCTGGTA
CGGCACAGCG CGGGTGCCAT CTCCCTGCTG TTGATCTACG TGTTCGCGGC GGAGGGCCTG
ATCATGGTCA TCCCGGAGAT CGGCGACGAC ATCTACAAGT GGCTGCCGTT CAACGTGGCT
CACAAATTCC TCACCGGGGA CGGCGAATCC AGTGGCGGTG ACAGTCTCGC GGCCGAGACG
CTGTCCACGT CCCCGCTGAG CCCCGGGTGG GCACTCGCGT ACTTCGCGGC ATTCGCGGTC
GCACTGTTGT TCGCGGCGAT CACCGTCGCG AACAAACGGG ACGCCTGA
 
Protein sequence
MTLLAVERIK LLTTRSPWWC AIVCIVLTSA FTALIVGNTP EDVFPVSVAM TQYSYTIGLA 
VIMVLGALAV TTEYRFGTIR TTFQAAPNRT AALLAKATVV AVLALLIGEL TAFTSWGVSL
LLAPEADLAL DSAADVINVA GVGIIYALSA VIAVAVGALV RHSAGAISLL LIYVFAAEGL
IMVIPEIGDD IYKWLPFNVA HKFLTGDGES SGGDSLAAET LSTSPLSPGW ALAYFAAFAV
ALLFAAITVA NKRDA