Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_39140 |
Symbol | |
ID | 8389235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 4236960 |
End bp | 4237727 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644977924 |
Product | hypothetical protein |
Protein accession | YP_003135683 |
Protein GI | 257057851 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.405828 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCTGC TCGCGGTCGA ACGCATCAAG TTGCTCACCA CCCGCTCACC GTGGTGGTGC GCGATCGTCT GCATCGTGCT GACAAGCGCT TTCACGGCGC TCATCGTCGG CAACACCCCG GAGGACGTAT TCCCGGTTTC CGTCGCCATG ACGCAGTACA GCTACACGAT CGGGCTCGCC GTCATCATGG TGCTCGGTGC GCTGGCGGTG ACGACCGAGT ACCGCTTCGG CACCATCCGC ACCACGTTCC AAGCGGCGCC CAATCGGACC GCGGCGCTGC TGGCCAAGGC CACCGTGGTC GCTGTACTCG CGTTGCTCAT CGGGGAGCTC ACCGCCTTCA CCTCGTGGGG TGTCTCGCTG CTGCTCGCGC CCGAGGCCGA CCTGGCGCTC GACAGCGCCG CCGACGTCAT CAACGTCGCC GGTGTCGGGA TCATCTACGC GCTGTCGGCG GTGATCGCCG TGGCGGTGGG CGCGCTGGTA CGGCACAGCG CGGGTGCCAT CTCCCTGCTG TTGATCTACG TGTTCGCGGC GGAGGGCCTG ATCATGGTCA TCCCGGAGAT CGGCGACGAC ATCTACAAGT GGCTGCCGTT CAACGTGGCT CACAAATTCC TCACCGGGGA CGGCGAATCC AGTGGCGGTG ACAGTCTCGC GGCCGAGACG CTGTCCACGT CCCCGCTGAG CCCCGGGTGG GCACTCGCGT ACTTCGCGGC ATTCGCGGTC GCACTGTTGT TCGCGGCGAT CACCGTCGCG AACAAACGGG ACGCCTGA
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Protein sequence | MTLLAVERIK LLTTRSPWWC AIVCIVLTSA FTALIVGNTP EDVFPVSVAM TQYSYTIGLA VIMVLGALAV TTEYRFGTIR TTFQAAPNRT AALLAKATVV AVLALLIGEL TAFTSWGVSL LLAPEADLAL DSAADVINVA GVGIIYALSA VIAVAVGALV RHSAGAISLL LIYVFAAEGL IMVIPEIGDD IYKWLPFNVA HKFLTGDGES SGGDSLAAET LSTSPLSPGW ALAYFAAFAV ALLFAAITVA NKRDA
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