Gene Svir_39110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_39110 
Symbol 
ID8389232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4233623 
End bp4234069 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content69% 
IMG OID644977921 
Producthypothetical protein 
Protein accessionYP_003135680 
Protein GI257057848 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.109575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.507161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCC ATGCCGAGGA CGTTCCGACG GGGCGGATCG AGTGCCCCGG AACGCACTCG 
ACCAGCTGGG TGACAGTGGG AACCGGAGCG GGGCCGGATG CGTCGGAATC CGACGTGGAA
CCCGTGGGAG CAACTGTGGC GCCGATCGAC CACGAACGGG CGCTCGCTGA TCGTCACGCA
CTCATCCAGC TGTGTCTCTA CGCGATGGAC CGGGCTCGTA GCGGGGGTGT CGCCGAACGG
ATCGAGCAGG GGCTGGCGAG TGTCGGGGTA CACGCCTTGC GGCCCGACGG CCAGCGTTTC
GATCCGTCGT TGCACGAGGC CGGCGGCGCC GTGCCGACCG ATGACGCGGC GCTGGAGGGC
ACGGTGGCCG AGACCGAGGT GGTGGGCTTC GTCGACCACG ATCGGCTGTT GCGGGCACCG
GTCGTCACCG TCTACACCCG CCGCTGA
 
Protein sequence
MSVHAEDVPT GRIECPGTHS TSWVTVGTGA GPDASESDVE PVGATVAPID HERALADRHA 
LIQLCLYAMD RARSGGVAER IEQGLASVGV HALRPDGQRF DPSLHEAGGA VPTDDAALEG
TVAETEVVGF VDHDRLLRAP VVTVYTRR