| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_39050 |
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| Symbol | |
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| ID | 8389226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 4225680 |
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| End bp | 4226567 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644977915 |
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| Product | predicted xylanase/chitin deacetylase |
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| Protein accession | YP_003135674 |
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| Protein GI | 257057842 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.619767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGG AGATCTTCGT CGCGTTCGGT GTCGACGTCG ACGCGGTCGG CGGATGGCTC
GGTTCCTACG GTGGTGAGGA CTCCCCGTGC GACATCTCTC GCGGTCTGTT CGCAGGGGAG
GTCGGTGTCC CCCGGATGCT CGAACTCTTC CGCAGGGCCG AAATACCCAC GACGTGGTTC
TGGCCGGGGC ATTCCATCGA AACCTTTCCC GAACAATTCG ACGCCTGTGT GGCGGCGGGT
CACGAGATCG GGGTGCACGG TTACAGTCAC GAGAACCCCA TAGCGATGAG TCGGGAGCAG
GAATCCGCGA TCCTGGACCA TTGCATTTCA TTGATCACCG AGCGGACCGG GAGGCGTCCC
ACCGGGTATG TCGCACCGTG GTGGGAATTC TCACCGGTGA CCAACGAATT GTTGCTCGAA
CGCGGCATCA AATACGACCA CTCGCTGATG CACCGTGATT TCGAGCCCTA TTATCTGCGG
GTCGGTGACT CCTGGTCGAA AATCGACTAC GAACAGCCGG CCGAAACGTG GATGAAACCT
CTGGAAAGGG GAGAGGAAAC GGACCTGATC GAGATACCCG CATCGTGGTA TCTCGACGAT
CTCCCGCCGA TGATGTTCAT CAAGGCCAAC CCGAACAGTC ACGGCTTCGT CAATCCGCGC
GATCTCGAAA TACTGTGGCG GGACCAATTC GATTGGGTGT ACCGGGAATG CGAGTACGCG
GTGTTCGCGG TCACGGTGCA TCCGGATGTG TCCGGACGCC CGCAGAACCT GCTCATGCTG
GAGCGGTTGT TCGGACACAT CCGCAGCCAC GACGGTGTTC GTTGGGCCAC GTTCGACCAG
ATCGCCGACG ACTTCCGGCA GCGTAGACCC CGGAATCCGG CGTCCTGA
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| Protein sequence | MAKEIFVAFG VDVDAVGGWL GSYGGEDSPC DISRGLFAGE VGVPRMLELF RRAEIPTTWF
WPGHSIETFP EQFDACVAAG HEIGVHGYSH ENPIAMSREQ ESAILDHCIS LITERTGRRP
TGYVAPWWEF SPVTNELLLE RGIKYDHSLM HRDFEPYYLR VGDSWSKIDY EQPAETWMKP
LERGEETDLI EIPASWYLDD LPPMMFIKAN PNSHGFVNPR DLEILWRDQF DWVYRECEYA
VFAVTVHPDV SGRPQNLLML ERLFGHIRSH DGVRWATFDQ IADDFRQRRP RNPAS
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