Gene Svir_38770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_38770 
Symbol 
ID8389198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4195541 
End bp4196788 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content71% 
IMG OID644977888 
Producthypothetical protein 
Protein accessionYP_003135647 
Protein GI257057815 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGTC GGGACGATTG GAGGGAGCGC ACCTCCGAGA CTGACCTCGT CGACGAGCTC 
CTCCAACCGA GTGGACCGCA TCCCCGTACG CGGCTGCTCA ACCGAGTTCA GCGTGGTATC
GGCAACGCCT TCGTGATCAT CGGGGCGCTC GTCGGGCTTC TGGCCGTCGC CTACGTGGTG
GACGTCGTGC TGAGCGCCGG GAAGGTCCCC CGGGGCGTGA CGGTGAACGG GGTGTCCGTC
GCCGGGCTCG ACCGGAAGGA GGCCGAGGCG GTACTGCGCC GTGAACTGGG GCCCCGGGTG
GAGAAGCCGG TCGAACTGCG CGCTGGGGAG GTCACGGTGT CGCTCGACCC CGGTGAGCTG
GGCCTCGCCG TGAACTGGGC GGCGACGGTG GAGCGCGCGG CCCGCCAACC GTGGGATCCG
TGGACGAGGG CGCTGTCGTT CTTCCGGGAG CAGGACACCC CGCTGGTGAC GGTGGTGGAC
GAACGGACGG CACGGGAGAG ATTGGACGAT CTGGTCGAGC GACGGATCAA CCGTCCCGCC
GTCGACGGCG GTATCGGTTT TCGGGCCCCT GACGCCGAGG ACGACGTGGG TCGAGGCGCT
GTGCAGCCAC AGGCGATCGA GCCGAAAGCG GGGGTCCGGG TGTCTGGCGT GGACACCGTT
GTGGAGGCCA TGCGGTCGCG TTGGCCCGGG GTCGACCGCT TCGACCTGCC CGTCGAGCCG
GTCGAGCCGA AGCTGACGTC CCGGGCGGTG GACGCCGCGT TGGAAGGGAT CGTGCGTCCA
CTGCTGGCGG GACCGATCCT GCTGCGAGGC AACGGCGTGG AGTCGGTGCT GCTTCCCGAG
GACGTCCGCA GGGCGCTCAG GTTCGAGATC CGGCACGGCG AGTTGCACGT GATGCTCGAC
CACGCGGTGT TGCGCGCCGC GGTGGCCACG GAACTACGGG CCAGTGAGAA GCCGGCGAAG
AACGCGGCGT TGGTGTCCGC CACCGGTGTT TCCGGGGTTC CCAAGGTGTT GCCCTCGGAG
CCGGGCGCGC GCATCGACTG GGACCGCACG TTCACCGAGC TGATGCGGAC GGTGACGAGG
CCGGCGGCGG AGGCCGAAGC GGGTGTGGAG GCCGAGGCGC TGTGGGGACC GCAGACCCCG
TCGGTCCCGG GGGAGTCACG TGAGCGGGAG GTCCCGGTGG TCTACGACAT CCTCGAACCC
GCAGTGACCA CCGACGACCT CCTCCGGTCC CGGCACGCCC CCAACTGA
 
Protein sequence
MAGRDDWRER TSETDLVDEL LQPSGPHPRT RLLNRVQRGI GNAFVIIGAL VGLLAVAYVV 
DVVLSAGKVP RGVTVNGVSV AGLDRKEAEA VLRRELGPRV EKPVELRAGE VTVSLDPGEL
GLAVNWAATV ERAARQPWDP WTRALSFFRE QDTPLVTVVD ERTARERLDD LVERRINRPA
VDGGIGFRAP DAEDDVGRGA VQPQAIEPKA GVRVSGVDTV VEAMRSRWPG VDRFDLPVEP
VEPKLTSRAV DAALEGIVRP LLAGPILLRG NGVESVLLPE DVRRALRFEI RHGELHVMLD
HAVLRAAVAT ELRASEKPAK NAALVSATGV SGVPKVLPSE PGARIDWDRT FTELMRTVTR
PAAEAEAGVE AEALWGPQTP SVPGESRERE VPVVYDILEP AVTTDDLLRS RHAPN