Gene Svir_38590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_38590 
Symbol 
ID8389180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4178479 
End bp4179183 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content66% 
IMG OID644977870 
Producthypothetical protein 
Protein accessionYP_003135630 
Protein GI257057798 
COG category[S] Function unknown 
COG ID[COG3595] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGATCG GTGGTGTCGT GCTGGTGGCT TTGGGGGTCG CTGTGGCGGC CGGCTGGGTC 
TGGCCGAAGA AGTCCGAGCA CACCGACACG GTGGACACCG CCGTCCGACA GGTGGAGATC
GACAACGGCT CCGGCGATGT GATCGTCCGG TCGGCCGACG TGTCCCACAC GGTGGTCAAA
CAGCGTTTCA GTTATCGCGG TGGTGATCCG GAACGGGCTT TCGAGGTGGC CGGTTCCACG
TTGTTGCTCC ACGGCTGCGG CAGTTTCTGC TCGGTGGACT ACGAGGTGAC GGTGCCGGTC
GGGACCACCG TGCGAGGGGA GGTGTCGTCG GGGGACGTCG TCGTCGAGGG CACCGCCGAC
GTGGACGTGC GTGCCTCCTC CGGTGACGTA AAGCTGCGGC TGCGCGATGC GAACAACGTG
TCGGTGGAGG CGAAGTCCGG CAACGTGAGC GCCGATCTCG ACGGGGTCGC GAAGGTCGAC
GCCAACACGC GTTCGGGGAG CATGGACCTC GATCTGAAGG GGGTCGACGT CGTTCGGGCC
GAGGCCAGAA GCGGTGACAT CACGGTCACG GTGCCCGAGG GGGAGTACCG GGTGGAGGCT
TCGACGAACA GTGGTGATCG GAATGTCAGG GGGGACGACC CGAACGCGGA TCGAGTGCTC
GAGCTGACGA CGGCCAGCGG CGACATCACC GTGTCGGACA GCTGA
 
Protein sequence
MAIGGVVLVA LGVAVAAGWV WPKKSEHTDT VDTAVRQVEI DNGSGDVIVR SADVSHTVVK 
QRFSYRGGDP ERAFEVAGST LLLHGCGSFC SVDYEVTVPV GTTVRGEVSS GDVVVEGTAD
VDVRASSGDV KLRLRDANNV SVEAKSGNVS ADLDGVAKVD ANTRSGSMDL DLKGVDVVRA
EARSGDITVT VPEGEYRVEA STNSGDRNVR GDDPNADRVL ELTTASGDIT VSDS