Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_38590 |
Symbol | |
ID | 8389180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 4178479 |
End bp | 4179183 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644977870 |
Product | hypothetical protein |
Protein accession | YP_003135630 |
Protein GI | 257057798 |
COG category | [S] Function unknown |
COG ID | [COG3595] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCGATCG GTGGTGTCGT GCTGGTGGCT TTGGGGGTCG CTGTGGCGGC CGGCTGGGTC TGGCCGAAGA AGTCCGAGCA CACCGACACG GTGGACACCG CCGTCCGACA GGTGGAGATC GACAACGGCT CCGGCGATGT GATCGTCCGG TCGGCCGACG TGTCCCACAC GGTGGTCAAA CAGCGTTTCA GTTATCGCGG TGGTGATCCG GAACGGGCTT TCGAGGTGGC CGGTTCCACG TTGTTGCTCC ACGGCTGCGG CAGTTTCTGC TCGGTGGACT ACGAGGTGAC GGTGCCGGTC GGGACCACCG TGCGAGGGGA GGTGTCGTCG GGGGACGTCG TCGTCGAGGG CACCGCCGAC GTGGACGTGC GTGCCTCCTC CGGTGACGTA AAGCTGCGGC TGCGCGATGC GAACAACGTG TCGGTGGAGG CGAAGTCCGG CAACGTGAGC GCCGATCTCG ACGGGGTCGC GAAGGTCGAC GCCAACACGC GTTCGGGGAG CATGGACCTC GATCTGAAGG GGGTCGACGT CGTTCGGGCC GAGGCCAGAA GCGGTGACAT CACGGTCACG GTGCCCGAGG GGGAGTACCG GGTGGAGGCT TCGACGAACA GTGGTGATCG GAATGTCAGG GGGGACGACC CGAACGCGGA TCGAGTGCTC GAGCTGACGA CGGCCAGCGG CGACATCACC GTGTCGGACA GCTGA
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Protein sequence | MAIGGVVLVA LGVAVAAGWV WPKKSEHTDT VDTAVRQVEI DNGSGDVIVR SADVSHTVVK QRFSYRGGDP ERAFEVAGST LLLHGCGSFC SVDYEVTVPV GTTVRGEVSS GDVVVEGTAD VDVRASSGDV KLRLRDANNV SVEAKSGNVS ADLDGVAKVD ANTRSGSMDL DLKGVDVVRA EARSGDITVT VPEGEYRVEA STNSGDRNVR GDDPNADRVL ELTTASGDIT VSDS
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