Gene Svir_38540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_38540 
Symbol 
ID8389175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4172779 
End bp4173891 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content68% 
IMG OID644977865 
Product2-polyprenylphenol hydroxylase-like oxidoreductase 
Protein accessionYP_003135625 
Protein GI257057793 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0151294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGCACA TCGAGAACAG CTGGCACCTC GCCCGCCCCT ACCTCGACGA GATCACGCAG 
CAGTTCTACC GGCTGCTGTT CACACTCGCC CCGTCCGCCC GGGATTTCTT CCCGGTGACC
CTGCAGGCGG AGAACGGGCG TGTGGTCCGA GCGCTGATAC GCGTATTGCG ACTGGTGAAC
CGGCCGGACG ATCTGATCCC CGTACTCCAA CAGCTCGGCC GGGACCACCG GAAATTCGGA
CTGCAGGCGG CGCACTACGA AGCCGTGGGC ACCGCCTTGC TCGGGGCACT CAAACACTGC
CTCGGACCCG CGTGGACACC CGAAGTGGAA CGAGCGTGGG CGGAAGCCTA CACACTCGTG
GCCCGGTCGA TGCAGGAAGC CGCGGCGGAC GCCGAGGCCG AGGCCGTCGA ACCGCCGTAC
TGGGTCGGCA CGGTCACCGA ACACCACAGG CTCAGCTGGG ACCTGGCCCT GGTACGGGTG
GAACCGGAGG AGGAGATCCC GTATCACGCC GGACAGTACC TCAGCGTCGC GGTGCCCCAA
CGACCACGAC TGTGGCGTGA CCTGTCACCG GCCAACGCCC CGAGACCGGA CGGTTCGCTG
GAGTTCCACG TACGCGCCAT CGACGGAGGA TGGGTGTCCC GGGCCATCGT CGGCCACACA
CAGCCCGGTG ACGTGTGGAC GTTCGGGGCC CCGATGGGGC GGCTCCGGGT CGACAGGGAG
TCGGGACGAC CGGTGCTGAT GATCGCGGGC GGCACCGGTG TGGCCCCTCT ACAGGCCATT
GTGGACGATT TGGGACGGTG GACGGACAAC CCCGAGGTCA CGCTGTTCTA CGGCGACCAC
TACTGGGACG ACCTCTACGC GCTCGACCAG CTGCAATCGT TCGCGGCCAG CAACCCGTGG
CTGACCGTGT GGCCCGTCGT GGAGGAACCG GGGTCCGTAC CGGGGGTCGA GGAGGGCACA
CTCGCCGAAG CCGTGACACG CAGGGGCCCC TGGCAGGAGC ACGACATCCT GGTGTCCGGA
CCGCCCGCCA TGATCGAAGC GACGGTGGCC GCCCTCATCC GCACGGGCGT TCACCCGAGC
CAGATCAACT ACGACCCGTT CCTGGCGATG TGA
 
Protein sequence
MEHIENSWHL ARPYLDEITQ QFYRLLFTLA PSARDFFPVT LQAENGRVVR ALIRVLRLVN 
RPDDLIPVLQ QLGRDHRKFG LQAAHYEAVG TALLGALKHC LGPAWTPEVE RAWAEAYTLV
ARSMQEAAAD AEAEAVEPPY WVGTVTEHHR LSWDLALVRV EPEEEIPYHA GQYLSVAVPQ
RPRLWRDLSP ANAPRPDGSL EFHVRAIDGG WVSRAIVGHT QPGDVWTFGA PMGRLRVDRE
SGRPVLMIAG GTGVAPLQAI VDDLGRWTDN PEVTLFYGDH YWDDLYALDQ LQSFAASNPW
LTVWPVVEEP GSVPGVEEGT LAEAVTRRGP WQEHDILVSG PPAMIEATVA ALIRTGVHPS
QINYDPFLAM