| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_38330 |
|---|
| Symbol | |
|---|
| ID | 8389154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 4152439 |
|---|
| End bp | 4153074 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644977844 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003135604 |
|---|
| Protein GI | 257057772 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1072] Panthothenate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.741273 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCGT TCGACGAACT GCTGACACGC GCACAACGGC TCGTGGACCG TAACGAGCGG
GCGTTGCTGG GCATCGCGGG AGCGCCGGCC GCGGGTAAGA CGTCGTTGGC GTGGCAGTTG
GCCGATGCGC TCGGTGCGCA CGCGGCCGTG GTGGGGATGG ACGGCTTCCA CCTCGCGCAG
GTGGAGCTGA ACCGGCTGGG CAAGGCCGAC CGCAAGGGCG CGCCCGACAC GTTCGACGCC
TACGGTTACG TGCACCTGAT CAGAAGGCTC GCGGCGGGGG ACGAACTGGT GTACGCGCCG
GAGTTCCGCA GGGAGATCGA GGAGCCCATC GCGGGTGCCG TCCCCGTGCC GCCGAGCGTG
CGCCTGGTGA TCACCGAGGG CAACTACCTG TTGCTGGACA CCGAGCCGTG GAACGAGCTG
CGTTCCCTGC TCGACGAGGT GTGGTTCCTC CAGCCGGACG AGGACGACCG CCTGGCCAGG
CTCGTGACGC GGCACCGTAA GTTCGGCCGG TCGTTGGTGG AGGCTCAGCA GCGGGCGCGT
GGCTCCGACC AGCGCAACGC CGACCTCATC ATGCGCACGG CGGATCGCGC CGACCTGATC
ATCGAGGACA TGGAGCTGCC GCAGTTCGCA GTGTGA
|
|---|
| Protein sequence | MTSFDELLTR AQRLVDRNER ALLGIAGAPA AGKTSLAWQL ADALGAHAAV VGMDGFHLAQ
VELNRLGKAD RKGAPDTFDA YGYVHLIRRL AAGDELVYAP EFRREIEEPI AGAVPVPPSV
RLVITEGNYL LLDTEPWNEL RSLLDEVWFL QPDEDDRLAR LVTRHRKFGR SLVEAQQRAR
GSDQRNADLI MRTADRADLI IEDMELPQFA V
|
|---|
| |