Gene Svir_38170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_38170 
Symbol 
ID8389138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4136514 
End bp4137803 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content72% 
IMG OID644977828 
Productphosphoribosylamine--glycine ligase 
Protein accessionYP_003135588 
Protein GI257057756 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0151] Phosphoribosylamine-glycine ligase 
TIGRFAM ID[TIGR00877] phosphoribosylamine--glycine ligase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGTGC GCGTCCTGGT TATCGGTTCC GGAGCCCGTG AACATGCTCT TGTCCTCGCC 
GCGTCCCACG ATCCGGCGGT GACGGCGCTC GCCTGTGCGC CGGGTAACGC CGGGACGGCC
GGGATCGCCG AGACACTCGG GGTGGAACAG ACCGATCCCG CGGCCATCGC CGAACTCGCG
GTGTCCTGGA AGGCCGATCT GGTGGTGATC GGGCCCGAGG TGCCGCTGGT GTTGGGGGCG
GCCGACGCCG TGCGTGCCGC AGGCGTGCCG TGCTTCGGGC CGAGTGCGCA GGCGGCGCGG
ATCGAGGGGT CGAAGTCGTT CGCCAAGGAG ATCATGGCCG CGGCCGGGGT GCCGACCGCA
CGCAGCGAGG TGGTGGACAG TCCGGCGGAC CTCGATGCGG CGCTGGCGAG GTTCGGCCCG
ACGTGGGTGG TGAAGGACGA CGGTCTCGCC GCGGGCAAGG GCGTGGTGGT CACCCCTGAC
CTGGAACAGG CCCGGAAGCA CGCGCTGATG TTGTTGGACG GCGGTCACCC GGTGGTGTTG
GAGTCGTTCC TGGACGGCCC CGAGGCGTCG CTGTTCTGCC TCGTCGACGG GAGCACCGTC
GTGCCGTTGC TGCCGGCGCA GGATTTCAAA CGGGTCGGTG ACGGTGACGC CGGTCCCAAC
ACCGGTGGTA TGGGCGCGTA CGCGCCGTTG CCGTGGGCGC CGCCCGATCT GGTCGACACG
GTGGTGTCCG GGATCGTGCG TCCCGTGGTG GACGAGTTGG CACGGCGGGG TTCACCGTTC
TCGGGGCTGC TGTACACGGG GTTGGCGCTG ACGTCGTCGG GCCCGCAGGT GATCGAGTTC
AACTGCCGGT TCGGGGATCC CGAGACGCAG GCGGTGCTGG CGCTGTTGCG GTCGCCGCTG
GCGCAGCTGC TGCATGCGAC GGCGACGGGG ACGTTGGCCG AGCAGCCGCC GCTTGAGTGG
GCCGACGGTG CCGCGGTGAC GGTCGTCGTG GCCGCCGACG GCTACCCGGG TCGTCCGCGC
ACCGGGGACG TGATCACGGG CAGTGAGGGC GAGGGCGTGC TGCACGCGGG CACGCGCCGT
CGTGAGGACG GCGCGGTGGT GTCCAGCGGT GGTCGGGTGC TGTCGGTGGT GGGTGTCGGT
GCCGATCTGG CGGCCGCGCG GGAACAGGCG TACGAGCGGG TGGGCAGGAT CAACCTGCCG
GGTTCGCATC ACCGTTCGGA CATCGCCGCT CGCGCCGTCC GAGGGGAGCT GTCGGTTCCG
GAACCGGCGC GGCCGACGGA GTCGGCGTAG
 
Protein sequence
MLVRVLVIGS GAREHALVLA ASHDPAVTAL ACAPGNAGTA GIAETLGVEQ TDPAAIAELA 
VSWKADLVVI GPEVPLVLGA ADAVRAAGVP CFGPSAQAAR IEGSKSFAKE IMAAAGVPTA
RSEVVDSPAD LDAALARFGP TWVVKDDGLA AGKGVVVTPD LEQARKHALM LLDGGHPVVL
ESFLDGPEAS LFCLVDGSTV VPLLPAQDFK RVGDGDAGPN TGGMGAYAPL PWAPPDLVDT
VVSGIVRPVV DELARRGSPF SGLLYTGLAL TSSGPQVIEF NCRFGDPETQ AVLALLRSPL
AQLLHATATG TLAEQPPLEW ADGAAVTVVV AADGYPGRPR TGDVITGSEG EGVLHAGTRR
REDGAVVSSG GRVLSVVGVG ADLAAAREQA YERVGRINLP GSHHRSDIAA RAVRGELSVP
EPARPTESA