Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_38050 |
Symbol | |
ID | 8389126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 4126430 |
End bp | 4127074 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644977816 |
Product | hypothetical protein |
Protein accession | YP_003135576 |
Protein GI | 257057744 |
COG category | [S] Function unknown |
COG ID | [COG3226] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCACACT ATCCCGCCAT GACCTCAGCA GCCAGTACGC CGAAGGGCGA GCGCAGGCGT GCCGCTCTCG TCGCGGCCGC GGCCGAGTTA TTGGCGGAGG GCGGGTTCGA CGCCGTGCGG CACCGTGCCG TCGCCGAACG TGCCGGGTTG CCGTTGGCCT CGACCACCTA CTACTTCGAC TCCCTCGACG AGCTGCTCTG CGCTGCGATG GAGCATCGCG GACGGGTCGA ACTCGCCGCC GGGCGCGCCA GGCTGGACGA GTTGACCACC GAGGACCGGA ACGTGGACGC GGTGGTGGAG CTGGTGCTCG ACCTGTTGTT GGGGCCCGAT CCTCGGCTCG AGGCGGTGGT GTTGCGGTAC GAGCGGTTCG TCGGCACGGC GCGGCGGCCC TATCTGCGTC CGCTGATGCG GACCCTGGCG GCCGAGCTGC GGGAGCTGCT CTCCGAGATC TTCGAGCGTT CGGGTTTCGG TGACGTCGAC GCCGAGTGGT TGGAGCGGCT CATCACGTTG GTGGACGGTG CGGTCGTCAA CGCGCTCATC GAGGTCAACC CCGACCCTCG AGCGGTCGCC GCGCGGGTGC TGCGTGAGGC GCTGCTCGAA GCGGGACCGT CCGACTCGGC CGTGTCCGGT CCCGAGCGGG GTTGA
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Protein sequence | MAHYPAMTSA ASTPKGERRR AALVAAAAEL LAEGGFDAVR HRAVAERAGL PLASTTYYFD SLDELLCAAM EHRGRVELAA GRARLDELTT EDRNVDAVVE LVLDLLLGPD PRLEAVVLRY ERFVGTARRP YLRPLMRTLA AELRELLSEI FERSGFGDVD AEWLERLITL VDGAVVNALI EVNPDPRAVA ARVLREALLE AGPSDSAVSG PERG
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