Gene Svir_38050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_38050 
Symbol 
ID8389126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4126430 
End bp4127074 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content70% 
IMG OID644977816 
Producthypothetical protein 
Protein accessionYP_003135576 
Protein GI257057744 
COG category[S] Function unknown 
COG ID[COG3226] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACACT ATCCCGCCAT GACCTCAGCA GCCAGTACGC CGAAGGGCGA GCGCAGGCGT 
GCCGCTCTCG TCGCGGCCGC GGCCGAGTTA TTGGCGGAGG GCGGGTTCGA CGCCGTGCGG
CACCGTGCCG TCGCCGAACG TGCCGGGTTG CCGTTGGCCT CGACCACCTA CTACTTCGAC
TCCCTCGACG AGCTGCTCTG CGCTGCGATG GAGCATCGCG GACGGGTCGA ACTCGCCGCC
GGGCGCGCCA GGCTGGACGA GTTGACCACC GAGGACCGGA ACGTGGACGC GGTGGTGGAG
CTGGTGCTCG ACCTGTTGTT GGGGCCCGAT CCTCGGCTCG AGGCGGTGGT GTTGCGGTAC
GAGCGGTTCG TCGGCACGGC GCGGCGGCCC TATCTGCGTC CGCTGATGCG GACCCTGGCG
GCCGAGCTGC GGGAGCTGCT CTCCGAGATC TTCGAGCGTT CGGGTTTCGG TGACGTCGAC
GCCGAGTGGT TGGAGCGGCT CATCACGTTG GTGGACGGTG CGGTCGTCAA CGCGCTCATC
GAGGTCAACC CCGACCCTCG AGCGGTCGCC GCGCGGGTGC TGCGTGAGGC GCTGCTCGAA
GCGGGACCGT CCGACTCGGC CGTGTCCGGT CCCGAGCGGG GTTGA
 
Protein sequence
MAHYPAMTSA ASTPKGERRR AALVAAAAEL LAEGGFDAVR HRAVAERAGL PLASTTYYFD 
SLDELLCAAM EHRGRVELAA GRARLDELTT EDRNVDAVVE LVLDLLLGPD PRLEAVVLRY
ERFVGTARRP YLRPLMRTLA AELRELLSEI FERSGFGDVD AEWLERLITL VDGAVVNALI
EVNPDPRAVA ARVLREALLE AGPSDSAVSG PERG