Gene Svir_38030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_38030 
Symbol 
ID8389124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4124117 
End bp4124752 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content66% 
IMG OID644977814 
Productpredicted Zn-dependent hydrolase of beta-lactamase fold protein 
Protein accessionYP_003135574 
Protein GI257057742 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCTCG TCCATTTCGG CCATTCCTGC GTATTGCTGG AAACCGAACA CGCCCGACTG 
TTGTTCGACC CCGGTGCGTT CTCCACAGGC TTCGAATCCG TGCGGGACCT CGACGCCGTG
CTCATCACCC ATCAGCACTA CGACCACATC GACACCGAGA AACTCCCCGC CCTGCTCGAG
GCCAACCCGT CGGCCCGCCT CATCGTGGAC GCCGGCACCA CCAAGACCAT CGACAACTTG
GGGATCGAGG TCACCACCGC GCAACCGGGC GACACCTTCG ACCTCGGCGG CACCCACGTC
ACCGTCGTCG GCGGCCAACA CGCGACGATC CACGCCGACA TCCCCGTGAT CCCCAACGTC
GGCTACATCA TCGACCACGG CGCGTTCTTC CACCCCGGCG ATGCGTTCTT CGTCCCCGAA
CAACGCATCG ACGTGCTCGC CCTGCCCACG GTGGGGCCGT GGCTCAAGGC CGCCGAGGTC
ATCGAATTCC TCCGGGCGGT GTCACCGAGG CTGGCCATCC CCGTCCACGA AGGCGTGCTG
TCCCGCCCGG CCATGTACAT CGGTCTGTAC ACCAACCTCG CACCCGACGG AACGGAAGTG
CGCGTCGTGC CCAAGGGGGA GCCCGTCACG ATCTGA
 
Protein sequence
MKLVHFGHSC VLLETEHARL LFDPGAFSTG FESVRDLDAV LITHQHYDHI DTEKLPALLE 
ANPSARLIVD AGTTKTIDNL GIEVTTAQPG DTFDLGGTHV TVVGGQHATI HADIPVIPNV
GYIIDHGAFF HPGDAFFVPE QRIDVLALPT VGPWLKAAEV IEFLRAVSPR LAIPVHEGVL
SRPAMYIGLY TNLAPDGTEV RVVPKGEPVT I