Gene Svir_38020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_38020 
Symbol 
ID8389123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4122558 
End bp4124057 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content71% 
IMG OID644977813 
ProductNAD-dependent aldehyde dehydrogenase 
Protein accessionYP_003135573 
Protein GI257057741 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.327698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGCA CCACGCAGGC CGTCGAGACA TTCGACTCAC TCAATCCGGC GACCGACGAG 
GTCGTGGGCA CGTACCCCGT GCACACCGAC GACGACGTGA ACACCGCCGT GGCCAAGGCG
AGAGAGGCTT TCCGGTGGTG GGCCTCGCTC GGTTTCGCGG AACGGGCCGA ACGGCTGCGG
CGGTGGAAGG GGATCATCGC CAGGCGGCTG CCCGAGCTGT GCGCCGTGGT CAGCGCCGAA
ACCGGGAAAC CCGCCGGTGA CGCCCAGCTG GAGGTGGTGC TCGCGGTCGA ACACATCGAA
TGGGCCGCCC GCAACGCGCG CAGGGTGCTC GGCCCCAAAC GGCGTTCGCC CGGTCTCCTG
TTGGCCAACC ACGCGGCCAC GGTCGAGTAC CAGCCGCTGG GGGTGGTCGG CGTCATCGGC
CCGTGGAACT ACCCCGTCTT CACCCCGCTG GGGTCCATCG GTTACGCGCT CGCGGCGGGC
AACGCCGTGG TGTTCAAGCC CAGTGAGTAC ACACCCGGTG TCGGGGCCTG GTTGGTGGAC
GCCTTCGCCG AGGCGGTGCC GGAGCACCCC GTACTGCAGT TGGTCACCGG TTTCGGCGCC
ACGGGGGCGG CGTTGACCCG CGCGGACGTC GACAAGATCG CGTTCACCGG TTCGGCCGCC
ACCGGCAGGA AGATCATGGC GGCGGCCGCC GAACGGCTCA CCCCGGTGAT CATCGAGGCG
GGCGGGAAGG ACCCGCTGCT CGTGGACGCC GACGCCGACC TCGACGCCGC CGCCGACGCC
GCGGTGTGGG GCGCGTTCTC CAACGCGGGA CAGACGTGCG TGGGCGTCGA ACGGGTCTAC
GTCCACGCCG CCGTGTACGA CGAGTTCGTC GGGAAGGTCA CCGAGCGCGC GCGGACGGTG
CGACCGGGCG AGCATTACGG GCCCATGACC ATGCGCTCGC AGTTGGAGGT CGTGCGCCGA
CACATCGCCG ACGCCCTGGC CAGGGGAGGC CGTGCCCTGC TGGGCGGGAC CGACGCGGTG
GGTGATCGCT ACGTGCGGCC CACGGTGTTG GTCGAGGTGC CGGAGGATTC CGAGGCCGTG
CGCGAGGAGA CGTTCGGGCC GACCGTCGTC GTCATGCGGG TGTCCGACAT GGACGAGGCC
GTGGAGAAGG CCAACGACTC CCGTTACGGG CTGGGGGCCA CCGTCTTCTC CCGGCGTCGG
GGCATGGAGT TGGCCCGACG CCTGCGGACG GGGATGACGT CGGTCAACGC GCCGTTGTCG
TTCGCGGGGA TCGCCTCACT GCCGTTCGGT GGTGTCGGTG ACTCGGGGTT CGGTCGCATC
CACGGGCCCG AGGGGTTGCG GGAGTTCGCG CGGCCGAAGG CCGTGGCGAG GCAGAGGTTC
CGGGTGCCGC TGGCGTTGAC CACGTTCGCC CGAAGCGCGA AGACCGACGA GTTCGTGGGC
AGACTCATCG CCACGTGGCA CGGCAGGCAC GGCGGGCGTG ACAAGTGGAA CAGGCGCTGA
 
Protein sequence
MTSTTQAVET FDSLNPATDE VVGTYPVHTD DDVNTAVAKA REAFRWWASL GFAERAERLR 
RWKGIIARRL PELCAVVSAE TGKPAGDAQL EVVLAVEHIE WAARNARRVL GPKRRSPGLL
LANHAATVEY QPLGVVGVIG PWNYPVFTPL GSIGYALAAG NAVVFKPSEY TPGVGAWLVD
AFAEAVPEHP VLQLVTGFGA TGAALTRADV DKIAFTGSAA TGRKIMAAAA ERLTPVIIEA
GGKDPLLVDA DADLDAAADA AVWGAFSNAG QTCVGVERVY VHAAVYDEFV GKVTERARTV
RPGEHYGPMT MRSQLEVVRR HIADALARGG RALLGGTDAV GDRYVRPTVL VEVPEDSEAV
REETFGPTVV VMRVSDMDEA VEKANDSRYG LGATVFSRRR GMELARRLRT GMTSVNAPLS
FAGIASLPFG GVGDSGFGRI HGPEGLREFA RPKAVARQRF RVPLALTTFA RSAKTDEFVG
RLIATWHGRH GGRDKWNRR