| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_37980 |
|---|
| Symbol | |
|---|
| ID | 8389119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 4118305 |
|---|
| End bp | 4120590 |
|---|
| Gene Length | 2286 bp |
|---|
| Protein Length | 761 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644977809 |
|---|
| Product | phosphoribosylformylglycinamidine synthase II |
|---|
| Protein accession | YP_003135569 |
|---|
| Protein GI | 257057737 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain |
|---|
| TIGRFAM ID | [TIGR01736] phosphoribosylformylglycinamidine synthase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0504799 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACACTC CCGCCGTCGA CACCACCGCA CACGCCGAGC GGACGCCGGA CCTCCCCCAG
CCGTATGCGG AGCTGGGGCT GGCGGACGAC GAGTACGCGC GTATCCGGGA AATCCTCGGG
CGTAGGCCCA CGGATGCCGA ACTCGCCATG TACTCGGTGA TGTGGAGCGA GCACTGTTCG
TACAAGTCGT CCAAGAAGCA CCTGGCCTAC TTCGGTGAGA CCACCACGCC GGAGATGCGT
TCCAAGATGC TCGCCGGTAT CGGCGAGAAC GCGGGCGTGG TGGACATCGG TGACGGCTGG
GCCGTCACGT TCAAGGTCGA AAGTCACAAC CACCCGTCCT ATGTGGAGCC CTACCAGGGC
GCGGCGACGG GTGTCGGTGG CATCGTGCGG GACATCCTCG CGATGGGGGC TCGGCCGCTG
GCGGTGGCCG ACCCGCTGCG GTTCGGACCC GCGGACGCGC CTGACACGCG GCGCGTGCTT
CCCGGGGTGG TCGCCGGTAT CGGCGGATAC GGCAACTGCC TGGGGCTGCC GAACATCGGC
GGCGAAGTGG TGTTCGACGA GAGTTATGCG GGGAACCCGC TGGTCAACGC CTTGTGTGTG
GGCGCGATGC GGGTGGAGGA CCTGCATCTG GCGCACGCGT CCGGAACCGG TAACAAGGTC
GTCCTGTTCG GTGCTCGCAC GGGTCTCGAC GGTATCGGCG GTGTGTCCGT GCTGGCCAGC
GACTCGTTCT CGGGTGACGA GAACTCCGGT GGGCGGAAGA AGCTGCCCAG CGTGCAGGTG
GGCGACCCGT TCACCGAGAA GCTCCTCATC GAGTGTTCGC TCGAGCTGTT CGCGAGGAAG
CTCGTCGTGG GCATCCAGGA CCTCGGTGGG GCGGGGCTCG CGTGCGCCAC GTCGGAACTG
GCCGCGGCCG GTGACGGCGG CATGCACATC GACCTCGACC GGGTCCCGTT GCGGGCCGAG
GGGATGACGC CCGCCGAGAT TCTGTCGAGT GAGTCGCAGG AGCGCATGTG TGCGATCGTT
CGTCCCTCCG ATGTGGACGA ATTCATGGAG GTGTGCCGGA AGTGGGACAT CACCGCCACC
GTGATCGGTG AGGTGACCGA CGGCGACCGG CTGGTCATCG ACTGGCACGG GCAGACCGTC
GTCGACGTGC CACCGCGCAC CGTGGCGCAC CAGGGGCCGG TCTACGACCG CCCCTACGCG
AGGCCGAAGG GGCAGGACGA CATCCAGGCC GACACGCCGG ATTCGCTTCC TCGTCCGTCC
ACTCCTGACG AATTGCGGGA GACGCTGCTG CGGATGATCT CGTCGCCGAA CCTGGCGTCG
AAGGAGTGGG TCACGCAGCA GTACGACCGC TACGTGCGCG GCAACACGGT GCTGGCCCAG
CCCTCGGACG CCGGCATGAT CCGGATCGAC GAGTCCACCG GGCGCGGTGT GGCGGTGTCC
ACCGACTGCA ACAGCCGGTA CGTCTACCTC GACCCGTATG CGGGCACGCA GCTGGCGTTG
GCCGAGGCGT ACCGCAACGT CGCCACCAGT GGCGCGACGC CGATAGCCGT CACCAACTGC
CTCAACTTCG GTTCGCCGCA GGACCCGGGG ATCATGTGGC AGTTCGAGCG TGCCGTGCAC
GGCCTCGCCG ACGGTTGCGC GCAGCTCGGC GTGCCCGTGA CCGGCGGTAA CGTGAGCTTC
TACAACCAGA CCGGCGACAA GGCGATTCTG CCGACCCCGG TGGTGGGCGT GCTCGGCGTG
ATCGACGACG TGAGCCGCCG CATCCCCACC GGCATCGGTG CCGAGCCGGG GGAGACCCTG
CTGTTGCTCG GCGAGACCAG GGACGAGTTC GGTGGATCGG CGTGGGCGCA GGTGGTGCAC
AACCACCTCG GCGGTCTGCC CCCGAAGGTC GACCTGGAGC GGGAGCGGTT GCTCGCCGAG
ATCCTCGTCG CGGGCTCGCG GGACGGCATG ATCTCCGCCG CCCATGACGT GTCCGACGGT
GGTCTGGCGC AGACCCTCGT CGAGATGGCC CTGATCGGCC AGTGTGGTGC GCGGATCGTG
CTCGACCCCG ACGTCGACCC GTTCGTGCAG TTGTTCTCCG AGTCGGCGGG CCGCGTGGTC
GTGGCGGTGC CGAGGACGGA GGAGCTGCGG TTCACCGAGA TGTGCTCGGC GCGGGGACTG
CCGTGGCGTA AGACCGGTGT GGTGGACCCC GAATCCGGTG CGTTGGAGAT CCAGGACGTC
GCCACCTTCA GCCTCGACGA GCTGCGCGAG GCCTGGGAGG GCACCCTGCC CGCGCTGTTC
GGCTGA
|
|---|
| Protein sequence | MDTPAVDTTA HAERTPDLPQ PYAELGLADD EYARIREILG RRPTDAELAM YSVMWSEHCS
YKSSKKHLAY FGETTTPEMR SKMLAGIGEN AGVVDIGDGW AVTFKVESHN HPSYVEPYQG
AATGVGGIVR DILAMGARPL AVADPLRFGP ADAPDTRRVL PGVVAGIGGY GNCLGLPNIG
GEVVFDESYA GNPLVNALCV GAMRVEDLHL AHASGTGNKV VLFGARTGLD GIGGVSVLAS
DSFSGDENSG GRKKLPSVQV GDPFTEKLLI ECSLELFARK LVVGIQDLGG AGLACATSEL
AAAGDGGMHI DLDRVPLRAE GMTPAEILSS ESQERMCAIV RPSDVDEFME VCRKWDITAT
VIGEVTDGDR LVIDWHGQTV VDVPPRTVAH QGPVYDRPYA RPKGQDDIQA DTPDSLPRPS
TPDELRETLL RMISSPNLAS KEWVTQQYDR YVRGNTVLAQ PSDAGMIRID ESTGRGVAVS
TDCNSRYVYL DPYAGTQLAL AEAYRNVATS GATPIAVTNC LNFGSPQDPG IMWQFERAVH
GLADGCAQLG VPVTGGNVSF YNQTGDKAIL PTPVVGVLGV IDDVSRRIPT GIGAEPGETL
LLLGETRDEF GGSAWAQVVH NHLGGLPPKV DLERERLLAE ILVAGSRDGM ISAAHDVSDG
GLAQTLVEMA LIGQCGARIV LDPDVDPFVQ LFSESAGRVV VAVPRTEELR FTEMCSARGL
PWRKTGVVDP ESGALEIQDV ATFSLDELRE AWEGTLPALF G
|
|---|
| |