Gene Svir_37860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_37860 
Symbol 
ID8389107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4106883 
End bp4107308 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content71% 
IMG OID644977797 
Productpeptidyl-tRNA hydrolase domain protein 
Protein accessionYP_003135557 
Protein GI257057725 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.259651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGAGG CGGTGCGTGT CACCCCGCGT TGGGTGATCC CGGAAGCGGA GTTGTCGGAG 
CGGTTCTCCC GCGCCTCCGG CCCGGGTGGG CAGGGCGTGA ACACCACGTC GTCGCGGGTG
GAGCTGTCGT TCGACGTGGC GCACTCTGCG TCCGTGCCGG ACGACCTGCG CAAACGCTTG
CTCGCCCGGT TGCGGGGCAG GCTCTCCGGT GGCGTGCTGA CCATCGCGGC GAGTGAACAC
CGCGAACAGT TGGCGAACCG CCGTGCCGCG CGAGAGCGGT TGGTGACGAT CCTGCGACAG
GCGGCCGCGC CGCCGCCGAA GAAGCGCCGC CCCACCAAGC CGACGAGGGG GTCGCAGGAA
CGTCGACTGG CGGACAAGAA ACGGCGGGGC CGGCTCAAAC GCGAGCGGAG GCCGTGGGAC
GAATGA
 
Protein sequence
MGEAVRVTPR WVIPEAELSE RFSRASGPGG QGVNTTSSRV ELSFDVAHSA SVPDDLRKRL 
LARLRGRLSG GVLTIAASEH REQLANRRAA RERLVTILRQ AAAPPPKKRR PTKPTRGSQE
RRLADKKRRG RLKRERRPWD E