| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_37460 |
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| Symbol | |
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| ID | 8389067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 4067838 |
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| End bp | 4068476 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644977757 |
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| Product | isopentenyl-diphosphate delta-isomerase |
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| Protein accession | YP_003135518 |
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| Protein GI | 257057686 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1443] Isopentenyldiphosphate isomerase |
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| TIGRFAM ID | [TIGR02150] isopentenyl-diphosphate delta-isomerase, type 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.50041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCAGA AACTCGGCCC CGAGGTGGAG CTCGACCCCG AGGTCGAATA CGTCGTGCTG
TGCGGCACGC GACATGAACG CATCGGGTAC GCGCCGAAAG CCGAGGTCCA TCACCAATCC
ACCCCCCTTC ACCTGGCCTT CTCCTGCTAC CTGTTCGACG CCGACGGCAA CTTCCTGGTC
ACCTGGCGGG CCAAGCACAA GCCCACCTTC CCGGGCGTAC GCACCAACTC CTGCTGCGGC
CACCCCGGCC CCGGCGAGAG CATCCCGGAT GCGATCGCCA GGCGGTTGAC CGACGAACTC
GGTATCGCCG CCGATCGCAT CGAACTGATG CTGCCCGAAT TCACCTACGA GGCGGCCATG
CCCGACGGGA CACGGGAGAA CGAGGTGTGT CCCGTCTACC GCGCCACGGT CGCCACTCGG
CCCGAACCCG AGCCGAACCC GGACGAGGTC CACGACACGG AATGGGTTCC GTGGGAGAAG
TTCCTGGCCG AAGTGGACGC AGACCCCACG AGTGTGTCCC CGTGGTGCGC ACTCCAAGTC
GAACAACTCC GCGCGCTCGG CCCCGACCCG CTCACCTGGC CGGTCGCTGA GAACCAGCGA
CTGCCCGAAG TCGCCCGAGA GCCGTTGGAA AAGCGCTGA
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| Protein sequence | MTQKLGPEVE LDPEVEYVVL CGTRHERIGY APKAEVHHQS TPLHLAFSCY LFDADGNFLV
TWRAKHKPTF PGVRTNSCCG HPGPGESIPD AIARRLTDEL GIAADRIELM LPEFTYEAAM
PDGTRENEVC PVYRATVATR PEPEPNPDEV HDTEWVPWEK FLAEVDADPT SVSPWCALQV
EQLRALGPDP LTWPVAENQR LPEVAREPLE KR
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