Gene Svir_37350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_37350 
SymbolmmuM 
ID8389056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4055374 
End bp4056261 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content72% 
IMG OID644977746 
Producthomocysteine methyltransferase 
Protein accessionYP_003135507 
Protein GI257057675 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2040] Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.493269 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCCGT TCGACGGCTC GGCACCCCTG GTGAGCGACG GCGGACTGGC GACCGAACTG 
GAGGCACGCG GACACGACCT CGGTGACGCG CTCTGGTCGG CCCGGCTGCT GCTCGACGCG
CCCGACGAGA TCGTCGCCGT CCACCGCGCG TTCTACGAGG CGGGTGCCGT CATCGCGACC
ACAGCCAGCT ACCAGGCGTC GTTCTCCGGA TTCGCCGAAC GCGGCATCGA CCGGGACACG
GCCACCACAC TGCTCCGCCG CAGCGTCGAA CTCGCCCGCC GGGCCCGTGA CGAGGCCCCC
GACGACGGGA GACGCCGGTT CGTGGCCGCG TCCGTGGGCC CCTACGGCGC CGCGCTCGCG
GACGGTTCGG AGTACCGCGG TCGATACGGG CTCTCCGTGG CACGACTACG GCGGTGGCAC
CGCCCCCGGT TGGAGGTGCT GGCCGAGACC TCCCCCGACA TCCTCGCCCT GGAGACCGTG
CCGGACATCG ACGAGGCCGA AGCGCTGGTC GAGGCCGTGG CCGGGCTGGG TGTGCCCGCA
TGGCTCACCT ACACCGTCGA CGGCGAGCGG ACCCGGGCCG GACAACCACT CACCGAAGCC
TTCGCCGTCG CGCAGTCCTC GCCCGACATC GTGGCGGTGG GGGTCAACTG CTGCACCCCC
GACGATGTTT CGACCGCTCT GGCCCTCGCC CGCGAGGTGA CGACCAAACC CCTGGTGGTC
TACCCGAACA GCGGCGAGAA CTGGGACCCC GTGCGGCGCA CCTGGTGGGG ACCGTCACGC
TACTCGCCGG AACTCGCCCG GCGCTGGACC GCCGAAGGGG CCCACGTCGT CGGCGGCTGC
TGTCGAGTGG GTCCCGCCGA TATCGCTCGC GTCGCCGACG TGCTGTAG
 
Protein sequence
MIPFDGSAPL VSDGGLATEL EARGHDLGDA LWSARLLLDA PDEIVAVHRA FYEAGAVIAT 
TASYQASFSG FAERGIDRDT ATTLLRRSVE LARRARDEAP DDGRRRFVAA SVGPYGAALA
DGSEYRGRYG LSVARLRRWH RPRLEVLAET SPDILALETV PDIDEAEALV EAVAGLGVPA
WLTYTVDGER TRAGQPLTEA FAVAQSSPDI VAVGVNCCTP DDVSTALALA REVTTKPLVV
YPNSGENWDP VRRTWWGPSR YSPELARRWT AEGAHVVGGC CRVGPADIAR VADVL