Gene Svir_37340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_37340 
Symbol 
ID8389055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4054743 
End bp4055339 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content70% 
IMG OID644977745 
Producttranscriptional regulator 
Protein accessionYP_003135506 
Protein GI257057674 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.186615 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGGACC CGCACGGCCG GGCGGCCGAG AACACCGCGA ACACCGAGGA AACCGGGGCC 
GCCGAAGGCG GTATGACCGA CACCGGCGAG ACCACATCCA CCACGGCCGC CGAGACCGTG
GCCCCGGACG AGCCGGACGT CGACGACTGG ACCCTCGTCC GATACATCCG CAGGCTCACC
ATGGAGGCCG ACCGGTTCCT CCAGGCGTTG AGCGACCTGC ACGACCTGCA CCGGACCGAC
CTCGCCGCGC TCTCGGCGAT CATGGACGCC GCCGACGAGG GACGGCTGCT GAGTCAGGGC
GACCTCGCCG CGACACTGAA TCTGAGCGCC TCGGCGACGA CCTCCGTCCT CGACCGCCTT
CAAACCGCGG GATACATCGA ACGGCGCAGG GACACCGCCG ACCGCAGAAA GCTCGTACTG
CACCTGCACG AATCGGCGTT GACGCTGGGC GACCAACTGT TCATCCCGCT CGGCGAGGCG
TACTTCACGG TGTGGCGAGA GTTCGACCGC GAACAGCGAC GCACCATCGT CAGGTTCCTC
GCGGCCACCC TCGCCGCCAC CGCGCGCACC AGCGCCGCAC TGCCCCGCAA GGGCTGA
 
Protein sequence
MEDPHGRAAE NTANTEETGA AEGGMTDTGE TTSTTAAETV APDEPDVDDW TLVRYIRRLT 
MEADRFLQAL SDLHDLHRTD LAALSAIMDA ADEGRLLSQG DLAATLNLSA SATTSVLDRL
QTAGYIERRR DTADRRKLVL HLHESALTLG DQLFIPLGEA YFTVWREFDR EQRRTIVRFL
AATLAATART SAALPRKG