Gene Svir_37280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_37280 
Symbol 
ID8389049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4048709 
End bp4049092 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content70% 
IMG OID644977740 
Productpredicted transcriptional regulator 
Protein accessionYP_003135501 
Protein GI257057669 
COG category[K] Transcription 
COG ID[COG3682] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.122249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGTGG CTAGGCTCGG AGAACTGGAG CGCGCGGTGA TGGAGGTGCT CTGGGCGCGC 
GACGAACCCG TCAGTGTGCG CGCGGTACAT GCCGCTCTGG GTGATCGCGG GCTCGCCTAC
ACCACCGTGA TGACAGTGCT GACCCGGTTG GCGGGCAAAG GACTGGTCCG GCGCAGCCGG
GAGGGTCGGG CGTGGTTGTA CCGGCCCGCG GCGGCGCGTG AGGCGTACGT CGCGGAGCTG
ATGCTCGAGG CCCTGGAGCT CAGCGGGGAC CGCGGTTCGG CGCTGGTGCA CTTCGCGAAG
TCGGTGACCA GCGACGAGGC CGACGCGCTG CGACAGGCGC TGCAGCAGGG TCATCAGCCG
GAGCAACAGG GTAAGCAGAC GTGA
 
Protein sequence
MDVARLGELE RAVMEVLWAR DEPVSVRAVH AALGDRGLAY TTVMTVLTRL AGKGLVRRSR 
EGRAWLYRPA AAREAYVAEL MLEALELSGD RGSALVHFAK SVTSDEADAL RQALQQGHQP
EQQGKQT