Gene Svir_37090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_37090 
Symbol 
ID8389030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4033571 
End bp4034089 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content67% 
IMG OID644977721 
Producthypothetical protein 
Protein accessionYP_003135485 
Protein GI257057653 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0651495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0184068 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCGG GGCAGCCGGA CCTTATCGCG ACATCTCCTC GGCCGGGGCA TTACGAGATC 
GACCCCGCAG GGTCCACGGT CGCGTTCCGG ACGACCCACC TGTTCGGACT GCTCCCGGTG
CGTGGGACGT TCACCGTCTC CCGCGGGACC GTCGAGGTCG CCGAGTCGAT CACCGAGTCC
ACGGTCCACG CGGAGATCGA CATGGCCAGC TTCCGCACCC TCACCCCGCT GCGGGACACG
GTCGTGCGCT CACGGCTGTA CCTCGACACC GATCGGTATC CGACGAGCAC CTTCGCATCG
CAACGGTGGG ACGGCGAGAC CCTCACGGGC ACGCTGACGG TACGGGACAT CGCCAAACCG
GCCACGCTCG TCGTGGGGCG ATCCGTCGTG GACGGTGATT CCTTCACCGT CCACGCCACG
GCGAGCGTCG ACCGCACCGA TTTCGGGGTG ACCGCGACCC CGGGCATGCT CGGGCGGTTC
CTTTCCTTCT TTCTGACCGT ACGGTGTGTG CGGAAATGA
 
Protein sequence
MTSGQPDLIA TSPRPGHYEI DPAGSTVAFR TTHLFGLLPV RGTFTVSRGT VEVAESITES 
TVHAEIDMAS FRTLTPLRDT VVRSRLYLDT DRYPTSTFAS QRWDGETLTG TLTVRDIAKP
ATLVVGRSVV DGDSFTVHAT ASVDRTDFGV TATPGMLGRF LSFFLTVRCV RK