Gene Svir_37060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_37060 
Symbol 
ID8389027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4030547 
End bp4031158 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content68% 
IMG OID644977718 
Producthypothetical protein 
Protein accessionYP_003135482 
Protein GI257057650 
COG category[S] Function unknown 
COG ID[COG1556] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.348377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0200163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTAGTG CGAAAGAGGA GATCCTGGCG CGGATCCGCG CGGTGTCACG GCCCGAACCG 
TCGCCGGTGC CGAGGGACTA CGAGCAGACC CGCGCCGTGG TCGACCCCGT GGGGCTGTTC
GTCGAACGCG TGGCCCACTA CAAGGCCACC GTCCACCGGG TGGACACCGA GGGACTTTCC
ACGCGGATTC GGACATGCCT GACCGAGCGA GGAGTGGAGA CGATGGTGGT TCCCGTCGAC
CTGCCCCCGG GTTGGCGGGT GGACGGAGTG CGGTGGCTTG CGGACGACCC GCCCCTGGAA
TTGTCTGAAG TAGATGCCGT TGACGGGGTG TTGACCGGGT GCGCCGTCGC CATCGCCGAA
ACCGGGACCA TCGTGCTCGA CGCGGGTGTG GCACAGGGCA GGCGCATGCT CACCCTGGTG
CCGGACTACC ACCTGTGCGT GGTGCGTGCC GAGCAGATCG AGGTGAGTGT TCCGGAGGCC
CTGCGGAGGC TGGACCCCGA ACGTCCGCTG ACCTTCGTCA GCGGCCCCTC GGCCACCAGC
GACATCGAGC TCGACCGGGT GGAAGGCGTA CACGGACCCC GAACGCTCGA GGTGCTGGTG
GTCGACGACT GA
 
Protein sequence
MASAKEEILA RIRAVSRPEP SPVPRDYEQT RAVVDPVGLF VERVAHYKAT VHRVDTEGLS 
TRIRTCLTER GVETMVVPVD LPPGWRVDGV RWLADDPPLE LSEVDAVDGV LTGCAVAIAE
TGTIVLDAGV AQGRRMLTLV PDYHLCVVRA EQIEVSVPEA LRRLDPERPL TFVSGPSATS
DIELDRVEGV HGPRTLEVLV VDD