Gene Svir_36990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_36990 
Symbol 
ID8389020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4023090 
End bp4023836 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content69% 
IMG OID644977711 
Producthypothetical protein 
Protein accessionYP_003135475 
Protein GI257057643 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0292206 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCATGT CCGAGAAGCC TGCGACCAAG TATTTCGACG CCGTGGTCGA CGAACTCTAC 
GGCGTGGAGC CCGGCGAATT CGTGTCACTT CGGAAGCGAT ACGAGGCCCA AGCCCGGCGT
GAGGGTGAGA AAGATCTCGC CGAGCGCATC CACCGGCTCC GCAAACCCAC CACCGCCGCC
GCACTGGTGA ACCGGTTGGC CCGAAAACAC ACCGACGAGC TCGCCTCGTT GGTCAAGCTC
GGACAACGGC TGCGCCGGGC CCATCGCGAC CTCGCCGGGG GACGGCTCCG GGAACTGACC
CACGAACGCA ACGAGCGGGT CCACGCCCTG CTCGACCGGG CGCAGGCGCT GTCCCAAGGA
AGGGTCGGCG AGCCGGTGCG ACGCGAGATC GAGGCGACGT TGGAGGCGGC GGTGAACGAC
GGGGAATCCG CCCACGCCGT GCTCGAAGGC CGACTGACCA CCGCACTGTC CCCACGGGAC
GTGTTCGAGT CCGCCTTACT CACGGGCGGG TCCGGGACCG AACCGAAGCG TGCACCGACC
ACGCCTCGAC TCTCCGAGCA GCAGGAACGA CAGGAACGAC AGCGGGCCCG CCGCGACGCG
GAGGCACGGG CCCGGCAGGC CCGAGACGAC GCGCGTAGGG AACTTCGTAT CGCCGAGCGG
GAGGAGGCCA AGGCGCGTCG CCGCACCGAG GCGGCCAGGG CCGCGTTGGA AGCGGCGGAT
CAGGAGGTGC GCCGGTACAC GCGTTGA
 
Protein sequence
MTMSEKPATK YFDAVVDELY GVEPGEFVSL RKRYEAQARR EGEKDLAERI HRLRKPTTAA 
ALVNRLARKH TDELASLVKL GQRLRRAHRD LAGGRLRELT HERNERVHAL LDRAQALSQG
RVGEPVRREI EATLEAAVND GESAHAVLEG RLTTALSPRD VFESALLTGG SGTEPKRAPT
TPRLSEQQER QERQRARRDA EARARQARDD ARRELRIAER EEAKARRRTE AARAALEAAD
QEVRRYTR