Gene Svir_36890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_36890 
Symbol 
ID8389010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4012595 
End bp4013077 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content67% 
IMG OID644977701 
Producthypothetical protein 
Protein accessionYP_003135465 
Protein GI257057633 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0678553 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTGG AGGGGCCGGT CGAGGGATTC GCGGTGGCCG TCGTACGAGA GGACGGCCGA 
TGGCGTTGTG AGCGACTTGA CGACGCTGTG TTGAGCGAGC TGGACACCGC CATCACCGAG
CTGCGGAAAC TGCGTTCGCC GGGGGCGGTG TTCGGGCTAC TCGCGGTGGA CGACGAGTTC
TTCGTCATCG TGCGGCCCGC GCCGAGTGGC GTGGCGTTGT TCCTCTCCGA CGCGTCCGCG
GCACTGGACT ACGACATCGC CGCCGACGTG CTGGACCTGT TGCGGGCCGA GGCGCCCGAT
GACGACGACG ATGTCATCTG GCCGGTCGGG GATCTGGAGA TCCTGTCCGA CCTCGGCATG
CCGGCGCCGG AGCTGGAGGT CATCGCCAAC GAGATCGAGC TCTACCCGGA CGAGCAGTTG
CAGATGATCG CCCAGCGGTG CGGGTTCGCC GATCAGTATT CGGCGGTGCT CGACGAGCTG
TGA
 
Protein sequence
MTVEGPVEGF AVAVVREDGR WRCERLDDAV LSELDTAITE LRKLRSPGAV FGLLAVDDEF 
FVIVRPAPSG VALFLSDASA ALDYDIAADV LDLLRAEAPD DDDDVIWPVG DLEILSDLGM
PAPELEVIAN EIELYPDEQL QMIAQRCGFA DQYSAVLDEL