Gene Svir_36840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_36840 
Symbol 
ID8389005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4005258 
End bp4006598 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content68% 
IMG OID644977696 
Producthypothetical protein 
Protein accessionYP_003135461 
Protein GI257057629 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0323397 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTATG TCCTGGGGAT ACATCTCGGC GCGACCCGCG TGACCGCAGC CGTGTGTCGT 
CATCGCCGAG GCCGGTGGGA ACAGGCCGAG GTGGTCCCCC TCGGACCCAC CACCCCCTGG
ACGGACTCCG TGCTGCACGT GTCCGCCCAC GGTGACCTCC TCGTGGGACA AGCCGCGCTG
CGACACGCCG CCACAGAACC CGAACGGGTG GCCAGAGCCC CGTTGCACCG TACCGGTGAT
CCGGTTCCGT TCGTGCTCGG TGACACGACC TATCCCGCCG AGACGTTGGC CGCCGGGATG
ATCGGTTGGG TGGCCGACCG CGTCGCCGAG GTCGAGACCG CCCACGCCGA ACGCATCGTC
GTGACACACC CTCCGGGCTG GTCGGCCTAC CGCAGAGGAC TGCTGCACCA GGCACTCGAC
GCCGCCGAAC TCCCCGGCGT ACTGGCCCTG CCCAGTCCGA TCGCGGCCGC CGAGAACCAC
TTCGCCCGCC AGCAAGTCGA GGACGTCGAA CCGGGACGAC TGCTGGCGGT GTGCCTCATC
GGCGGCGTGC ATGTCGAAAC GGCCTTGCTC CGCAGGTCGC CACTCGGTCT CGAGTTGCTG
GCACACGAGG GGTCCGACGA ACACGAGGCG GGCTGTCGCT TGGACGACTT GTTGGTGCGG
CACGTCGCGG AACGCACCGA GACGGACACC GGTGATCCTT TCGCGATGAG CCGATTACGC
GCGGCGTGTA TCGCGGCGAA GGAACGGTTG TCGACGACAC CGGAGGTGTT CGTCACCGAC
ACCGTGTCGG TGACCCGGCA GGAGTTCGAG GAACTGGCCA GGCCGGTGTT GGAGGTCGCG
ATCGGGAGAT TGCGCCGGCT GACTTCCCGG GTCCCCTCCG AACAGCTCGC CGCGGCCCTT
ATGGCCGGAG GAAGCGCACG CATCCCCCTT GTCTCCGCGC TGGCTCGCAC TATGCTCCCG
TGCCCCGTCG TGGTCGACGA CGACCCGGGC ACGGCCCTGT GTCGGGGCGC GGCCTTGTCG
GCACGCCCGA GGCCTCGAAA CCCCCGGCCG ACCCAGGACT CCAAGTCCAA GATGGACCAA
GCGAGCGGGT CGGACATGGC GGACATGATG GACACAATGG ACACACTGAT CTCGACGGAC
GCCGTGAAAG CATGGCCGGC GAAGGAAGCG AACTCACTCG ACGTACCCAT AGGCTATGGC
TCGGACGTCT CCTCGTTCGA CGACGAGGAA CCACCACCGC AACGACCCCC CGTGAAGATC
ACGCCGTTGC AGCCACCCCG CCGTCGGTTC GCGTTGGCCC GCAAGAGCAA CTCGACCGAT
GACCGAGACG AGGAGCGCTG A
 
Protein sequence
MRYVLGIHLG ATRVTAAVCR HRRGRWEQAE VVPLGPTTPW TDSVLHVSAH GDLLVGQAAL 
RHAATEPERV ARAPLHRTGD PVPFVLGDTT YPAETLAAGM IGWVADRVAE VETAHAERIV
VTHPPGWSAY RRGLLHQALD AAELPGVLAL PSPIAAAENH FARQQVEDVE PGRLLAVCLI
GGVHVETALL RRSPLGLELL AHEGSDEHEA GCRLDDLLVR HVAERTETDT GDPFAMSRLR
AACIAAKERL STTPEVFVTD TVSVTRQEFE ELARPVLEVA IGRLRRLTSR VPSEQLAAAL
MAGGSARIPL VSALARTMLP CPVVVDDDPG TALCRGAALS ARPRPRNPRP TQDSKSKMDQ
ASGSDMADMM DTMDTLISTD AVKAWPAKEA NSLDVPIGYG SDVSSFDDEE PPPQRPPVKI
TPLQPPRRRF ALARKSNSTD DRDEER