Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_36480 |
Symbol | |
ID | 8388969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3969225 |
End bp | 3970175 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644977661 |
Product | DMT(drug/metabolite transporter) superfamily permease |
Protein accession | YP_003135427 |
Protein GI | 257057595 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.171631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.909358 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCACGTC TCGATCGACT TCTCGCCGTG CTCACCGCCG TCCTCTGGGG CTGCAACTTC CTCGCGGTCC ACGCGATGCT CACGCACTTC CCACCGCTGT TCGCGGGCTG CATCCGGTTC GTGCTCGTCG CCCTGCCCAC GATGGTCTTC GTGCCGTGGC CGAAAGTCCG AGTCCGGTGG CTGATCGGGT ACGGCCTCGG GTTCGCCACG TTGCAGTTCG CGTTCCTGTT CGTCGCCATG GACACCGGCA TGCCGACCGG ACTCGCGTCG CTCGTGTTGC AGGCCTCGGC GCCGTTCACC GTCGTCCTCG GTGCGCTGCT GTTGCGGGAA CGGTTGAGCG GCCGACAGGT CGTGGGCATC GTCTTCGCCG TCCTCGGCAT GGCGGCCATC GCGTGGCAAC GCGCCGAGCA CGCGGCTCTG CTGCCGGTGA TCCTGACCCT GCTCGGCGCC CTGAGCTGGG CGGTGGGCAA CCTGTGCGCG CGCAAGGCCG AGGCTGTCAA CCCGCTGCAC TTCACGCTGT GGGCGTCGGT GGTCCCGCCG ATCCCGATGT TCGCGCTGTC ACTGCTCTTC GAAGGGCTGG ACGCCCAGTG GACCGCGGTG TCGACGGCGT TGTCCGGCGA CGCCTGGATC GCGCTCGCGG GCCTGGCCTA CGTCGTGGTC TTCGGCACGG TCGTGGGCTC GGGCATCTGG ACCACGCTCA TGCGCCGCAA CCCCGCGAGC ACGGTCGCGC CCTTCTCGTT GCTGGTGCCC GTGGTGGGGC TCAGTCTGGC GTTCGTCCTG CTCGACGAGC GACCGACGCC CGTGGAGATC GCTGCCGCGG TGGTCGTGGT CGGCGGAGTG CTGTTGGGGT CACTTCCCCG CCGACCACGA CGGCGCGCTC AGGCCGACAC CGGCTCCTCC GCCGGCTCCG ACCGCGGCGA CACGCGCCCC GCGAGGATGT CCTCGGCGTA G
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Protein sequence | MPRLDRLLAV LTAVLWGCNF LAVHAMLTHF PPLFAGCIRF VLVALPTMVF VPWPKVRVRW LIGYGLGFAT LQFAFLFVAM DTGMPTGLAS LVLQASAPFT VVLGALLLRE RLSGRQVVGI VFAVLGMAAI AWQRAEHAAL LPVILTLLGA LSWAVGNLCA RKAEAVNPLH FTLWASVVPP IPMFALSLLF EGLDAQWTAV STALSGDAWI ALAGLAYVVV FGTVVGSGIW TTLMRRNPAS TVAPFSLLVP VVGLSLAFVL LDERPTPVEI AAAVVVVGGV LLGSLPRRPR RRAQADTGSS AGSDRGDTRP ARMSSA
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