| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_36250 |
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| Symbol | |
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| ID | 8388946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3946432 |
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| End bp | 3948594 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644977639 |
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| Product | membrane carboxypeptidase (penicillin-binding protein) |
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| Protein accession | YP_003135406 |
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| Protein GI | 257057574 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.808415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTATCC GGAGCGGTCT GTTCAAGCTG TTGGGTCTGT GCCTGCTCGC AGGCGTCCTT
GTCGCCGGGA TTCTGTTTCC CGTTACCGGA GCCGCGGGCG TGGTCGCCAA TCAGGCAAGT
GACACGGTGG ACTCGATGTC GACCGACCTT GCCGAGGAGC CTCCCCCACT AATCACGACC
CTCACCGACA GGGATGGCAA ACCAATCGCC ACCCTGTACG ACCAGTACCG CATTCCCACT
GCCCCGGACG AGATTTCCGA GGCCATGAAG TGGGCGATGA TCTCGGTGGA GGACCGCCGT
TTCTACGATC ATCACGGCGT CGACTGGAAA GGCACGCTCC GCGCCGCCAT CACCAACACT
TCCGGGGGTG ACACCCAGGG CGCTTCCACG TTGACACAAC AGTATGTGAA AAATTATCTG
ATCAATGTCA CTCACCGGGG TGACACACTG GGGCAACAAA AAGCTCAGGA AGTGTCGATA
GCCCGGAAAC TCAAGGAAGC CCAGATCGCC ATTCAGCTGG AAACGAAGAT GACGAAGGAG
GAAATCCTCA CCGGATACCT CAACGTCGTC GAGTTCTCCC GGCAAATTTA CGGTGTCGGC
GCAGCGGCCC GCGCCTATTT CAACACCGAG GCTTCGAAAC TCACGGTGCC CCAGGCCGCC
CTTCTGGCCG GCATGGTGAA CAACCCCGCC GTGCTGGACC CCTGGAACAA TCCGGAAGGG
GCGAAGAAAC GGCGCAACTT CGTGCTCGAC AAAATGGTCG AAAACCGCAA ATTGGACCCC
GAGGACGCTG AACGGATCAA GGAGGAACCG TTGGGCGTGC TCCCCGGTGG TCCGAACAAA
CCCGCGTCCA CCTGCATCAG CGCGAAACCG GCGTACGGCT TCTTCTGTCA ATACGTCGAG
GACTACCTGA TCGACCTCGG CATGGACAAG GACGACCTCT ACACGGGTGG TTACACCATT
CGCACGACGA TGGACTCCAA GGCCACCGAG GTCGCCAAGG ACGCGGTCGA GAAGGAGGTC
AGCAAGACCG AACCCAACGT CGCCAACACG CTGTCCCTGG TGAAACCGGG CAAGGACCGG
CACGAGGTGG TCGCGCTCGT CGCCAACAAG GACTACGGCA CGGACAAGGA AGCCGGACAG
GCCTCACAGG GTCTGCCGTA CGACGTCTTC AACGTCACGG GCGCCGGCTC CAGCTACAAG
ATCTTCACCG CCGCCGCCAC GCTGGAGCAG CGCAAGTACG GCATCTTCGA CACGGTCCCG
GTGCCGAACT TCCACGTCTC CCCGGTGTTC AACTGGGGTG GCGAACACTG CCCGACCCGG
CCTTCGGGCA TCCGCACCTA CTGCGTCAAG AACGCCAGCG ACGGTGGCGA CACCTCGATG
TCCCTGCAGG ACGCTCTGGC CAAATCGCCC AACACCACGT TCGTCATCCT CGAAGAGGAA
GTGGGCATGA AGGCGGTGGT CGAAATGGCC AGCAAACTGG GCCTGCGCAA GACGATGGCG
TCGCGGCCCG CCGACGGGAA CGTGCCCGAC CCCGACCACG AGCGGCCCGA GTACAGCATG
AACCAGATCG AGTTCTACGG GCCGAACGAG TTGGCACCGC AGGGCCGGGG GATGTTCACG
CTCGGCGCCA GTCCCGTCAG TGGCCTGGAG ATGGCCAACG TCGCCGCGAC GATCATGAGT
GGTGGCGTGT GGTGCCCGCC CACACCGATC CTGGAGGTCA TCAACCGGGG CGGCAAGGAG
TTCCCGGTCA AGGACAAGCC CTGCGAGCAG GTGGTACCGG AGGGCTTGGC GAACACGCTC
GCCGTCGGCC TGAGCAAGGA CACCGCCCCC GGCGGCACGG CGTACAACGC CGCCTCCTCG
GCGGGCTGGG ACCGCCCGAT GCTCGGTAAG ACCGGGACGA CGCAGTTCCA GGGGTCGGCC
ACCTTCGTCG GTGCGACCCC GCAGCTGGCC GGCGCGGCGA TGATCTTCCG ACCGGACCTG
CCGCACGGTG GCCTGGTCGA CGGTGGCCCC GGCAACGTCC ATGCGACCAG TTACGGAAAC
AGCAACATGT TCGGCGGTAA GACGCCGGCG CGCACCTGGT TCAGGGCGAT GAAGCCGATC
ATGGAGGGAC TGCCCAAGAA GCCACTTCCG GAACCCGACC CGCACTACGC GAAGGTGCGG
TAG
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| Protein sequence | MSIRSGLFKL LGLCLLAGVL VAGILFPVTG AAGVVANQAS DTVDSMSTDL AEEPPPLITT
LTDRDGKPIA TLYDQYRIPT APDEISEAMK WAMISVEDRR FYDHHGVDWK GTLRAAITNT
SGGDTQGAST LTQQYVKNYL INVTHRGDTL GQQKAQEVSI ARKLKEAQIA IQLETKMTKE
EILTGYLNVV EFSRQIYGVG AAARAYFNTE ASKLTVPQAA LLAGMVNNPA VLDPWNNPEG
AKKRRNFVLD KMVENRKLDP EDAERIKEEP LGVLPGGPNK PASTCISAKP AYGFFCQYVE
DYLIDLGMDK DDLYTGGYTI RTTMDSKATE VAKDAVEKEV SKTEPNVANT LSLVKPGKDR
HEVVALVANK DYGTDKEAGQ ASQGLPYDVF NVTGAGSSYK IFTAAATLEQ RKYGIFDTVP
VPNFHVSPVF NWGGEHCPTR PSGIRTYCVK NASDGGDTSM SLQDALAKSP NTTFVILEEE
VGMKAVVEMA SKLGLRKTMA SRPADGNVPD PDHERPEYSM NQIEFYGPNE LAPQGRGMFT
LGASPVSGLE MANVAATIMS GGVWCPPTPI LEVINRGGKE FPVKDKPCEQ VVPEGLANTL
AVGLSKDTAP GGTAYNAASS AGWDRPMLGK TGTTQFQGSA TFVGATPQLA GAAMIFRPDL
PHGGLVDGGP GNVHATSYGN SNMFGGKTPA RTWFRAMKPI MEGLPKKPLP EPDPHYAKVR
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