Gene Svir_36060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_36060 
Symbol 
ID8388927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3931313 
End bp3931822 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content65% 
IMG OID644977621 
ProductProtein of unknown function (DUF1469) 
Protein accessionYP_003135388 
Protein GI257057556 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.328772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.5893 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCGCG TGAGCAGCCC CAAGAACCTT CAGCAGGACG GCGCGGGGGG CCCTGCGGTG 
CCCTACCTCC CGTTGTCCTC AGACGACGGC ACAGCACAGG ACGCGTCCAT CGGCTCCCTG
GTGAAGGACG CGGCCCAACA CGTGTCCACG CTGGTCAGAG CCGAGGTCGA ACTGATCAAG
ACCGAGGCGG TCGGCGAGGC GAAGAAGGCG TTCAAGGGCA GTCTCTTCTT CGTCGTCGCC
GGTGTCATCG CGCTGTACAG CTCGTTCTTC TTCTTTTTCT TCCTCGGCGA GCTGCTGGCC
GAGTGGCTGC CGCGGTGGGC GGCGTTCGGC ATCGTCTTTT TGGTGATGCT GCTGACGGCC
GGACTCGCGG CCTACATCGG CCTGCGGAAA TGGAAACGGG TGCGCAAGCC CCAGCGCTCG
ATCGACAGCC TCAAAAGCAC CGCCGACACG CTGAGGCACC GGCGGACGCA CGACGCAAGC
TCCACTCCGA ACTCCGTGAC CACGTCCTGA
 
Protein sequence
MRRVSSPKNL QQDGAGGPAV PYLPLSSDDG TAQDASIGSL VKDAAQHVST LVRAEVELIK 
TEAVGEAKKA FKGSLFFVVA GVIALYSSFF FFFFLGELLA EWLPRWAAFG IVFLVMLLTA
GLAAYIGLRK WKRVRKPQRS IDSLKSTADT LRHRRTHDAS STPNSVTTS