Gene Svir_36000 details

Gene Information

• Locus tag: Svir_36000
• ID: 8388921
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Saccharomonospora viridis DSM 43017
• Kingdom: Bacteria
• Replicon accession: NC_013159
• Strand: -
• Start bp: 3924682
• End bp: 3925428
• Gene Length: 747 bp
• Protein Length: 248 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 644977615
• Product: hypothetical protein
• Protein accession: YP_003135382
• Protein GI: 257057550

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.14694
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 0.163356
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCTCGCGT GCATGAGCGA CCCACTCGCA CCGCTGATGG AACTCGGCGG TGTCGCCGAG 
GCCGCGAAGA GCGCCCAGGA CGCCGTGTTC GCCGTACACC GGTTACCCGC CAACCTGCGG 
GGCGGTTCGG CCACCGCCGC GGAAGCGTCG GTGCGTGCGG CCAGGGCGTC CGCAGCACTC 
GACGGTGCCG ACCCCGACCT GCCCGACGAC GGCGTTGTGG CCGACCCCGT GCTCGCGGGT 
TCGCTGCGGG TGGCCAAGGC CACCGAATCA CTGCTGCCGA CGTGGCGGCG GGCGCCTTTG 
CAGGTGCTGG CGAGGATGCA CGTCCTCGCC GCGGCGGACC TGACCGACGA CGCCGACGCG 
CTCGGTAGGC CCCGACCGGC CGACGGGGTG GCGCCGCGCC TGGAGTTGCT CGCACAGCTC 
GTCACGGGGG CCACCAGCGT GCCCGGACCG GTGTTGACGG CCGTCGTGCA CGGGGAGCTG 
CTGACGTTGC GCCCGTTCGG ATCGGCGGAC GGTGTGCTCG CGCGCGCCGC GGCCCGTCTC 
TCGATGATCG CCACGGGGCT GGACCCGAAG GCCCTCACGG TGCCCGAGGT CGCGTTCTTC 
CGCAGGCAGC GTCGGTATGA GGAGGCGGCA CAGGCGTTCG CTTCCGGTGA GCCCGACGGT 
GTGCGCCAGT GGTTGCTGTT CTGCTGTGAG GCCTTCGAGA CGGGTGCTCG CGAAGCGAAG 
GGGATCGCCG ACGCGACGGG TGCGTGA 

 

Protein sequence

MLACMSDPLA PLMELGGVAE AAKSAQDAVF AVHRLPANLR GGSATAAEAS VRAARASAAL 
DGADPDLPDD GVVADPVLAG SLRVAKATES LLPTWRRAPL QVLARMHVLA AADLTDDADA 
LGRPRPADGV APRLELLAQL VTGATSVPGP VLTAVVHGEL LTLRPFGSAD GVLARAAARL 
SMIATGLDPK ALTVPEVAFF RRQRRYEEAA QAFASGEPDG VRQWLLFCCE AFETGAREAK 
GIADATGA