Gene Svir_35710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_35710 
Symbol 
ID8388892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand- 
Start bp3888854 
End bp3889828 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content72% 
IMG OID644977586 
ProducttRNA(Ile)-lysidine synthetase 
Protein accessionYP_003135354 
Protein GI257057522 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID[TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.165906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.743005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGACGG TACGTCGCGC GGTGCGGCTG TTCCTCTCCG AACCGGAGGT GTCCGCGTGG 
CTGGGTTCGG GGCAGGTGTT CGTGGCCGTG TCGGGCGGGG CCGATTCGCT CGCGCTCGCG 
GAGGCCGCCG CGCACGTTGG GCGGCGACGA GGCCTGACTG TGGGTGCGCT GGTGGTCGAC 
CACGGCCTGC AGGCCGGATC GGCCGAGGTG GCCGAATGGG CCGCGCAGAC GGCGTTGCGG 
CTGGGGGTGG ACACGGCCAA GGTGCTTCCG GTGACGGTGA GCGGAGGCGG TGGTCCCGAG 
GCCGCGGCCC GCAGGGCGCG TTACGCCGCG TTGCGGGAAC ATGCGGGTGA CGACGCGCTC 
GTGCTGTTCG GACACACCCG CGACGACCAG GCCGAGACCG TGCTGCTCGG ACTCGGCAGG 
GGGTCCGGGC CACGGTCGTT GGCCGGTATG CGTCCGCTCG ACCCGCCGTG GGGGAGGCCG 
TTGCTGGACG TGCCCAGGTC CGTCACCGCG GCGGCGTGCG AGGAACTCGG GGTGAGCCCG 
TGGCACGACC CGCACAACAC CGATCCCCGG TTCCGGCGGG TGCGGGTGCG CCACGAGGTG 
CTGCCGTTGT TGGAGGACGT GCTCGCCGGT GGTGTCGCCG AGGCGCTCGC TCGTACGGCG 
CGGCAGCTTC GGGAGGACTG TGACGCGCTC GACGCGATGG CGGCCGAGGT GGCCGAACAG 
GCTCGGGACG GCTCCGAACT GCGCGTCGAC GTGCTCGTCC GTGTGCCGCC CTCCGTGCGG 
AGGAGGGTGT TGCGCACCTG GTTGCTCGAG GGCGGGGTCC GGGAACTCAC GGACGCGCAC 
CTGCGGTCGG TGGACGATCT CGTGGGGCGT TGGCGTGGGC AAGGCGGCGT TTTCCTACCC 
GGCGATGTCG AGGCCCGCAG GGGGCATGAA AAGCTCGTTT TGAACCGATG CCAACCCACT 
GTTCGAGGGA GCTGA
 
Protein sequence
MLTVRRAVRL FLSEPEVSAW LGSGQVFVAV SGGADSLALA EAAAHVGRRR GLTVGALVVD 
HGLQAGSAEV AEWAAQTALR LGVDTAKVLP VTVSGGGGPE AAARRARYAA LREHAGDDAL 
VLFGHTRDDQ AETVLLGLGR GSGPRSLAGM RPLDPPWGRP LLDVPRSVTA AACEELGVSP 
WHDPHNTDPR FRRVRVRHEV LPLLEDVLAG GVAEALARTA RQLREDCDAL DAMAAEVAEQ 
ARDGSELRVD VLVRVPPSVR RRVLRTWLLE GGVRELTDAH LRSVDDLVGR WRGQGGVFLP 
GDVEARRGHE KLVLNRCQPT VRGS