Gene Svir_35360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_35360 
Symbol 
ID8388857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3852048 
End bp3852800 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content65% 
IMG OID644977553 
Producttranscriptional regulator 
Protein accessionYP_003135321 
Protein GI257057489 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGAG ACAACGGAGG TGCGGTGACT AATCGACGAG AACGACTGCG TGCGGCATTG 
GATCGCGACC TGCGACGCAC TGCCAGACGC CTGTTGGTGT CGGGTGGCAT CGACGCGGTG
ACGTTGGCGG CTATCGCCCG GGAGGTCGGG ATCACCCCGC CTGCCATCTA CCGCTACTAC
AAAAGTCGCG ACGACCTCAT CTACACGCTG GCCGAGGACG TGATCGGCGA GCTCGTCGGT
GAACTCAGAG CCGCCGCGGC GGAGCACCCC GAACGCCCGG ACCGACAGCT CATCGCCATG
ATCCGGGCTT TCACCGGTTG GGCCGCGAAG AACCGGGCGG AGTACGGGTT CGTCTTCGGC
GTCCCGTCGC CCACGGTCGA CGACGTGTAC CGAGAGATCG CCAAGGCCTG GACGGTCAAG
ATCGGTGGGA CCTTCGGTGA GCCCTACCTC CGGTTGTGGC GGCAACGTCC CTTCGACGTG
CCCGCGGAGA GTGAACTGGA GCCCGCACTC CAGAAACAGC TGGACAGCTA CCGCGCCCTC
GTCGGTCTGG AGCGGATGCC GCTCGGTGCG ATCCTCGTGT TCATCGAGTG CTGGTCGCGG
ATGTACGCCT CGATGTCCTT CGACGTCTTC GGCCTCATGA GCGCCACGTT CACCGACATG
ACCCCCATGC ACGAGCGCAT GTGCCGAGGG GTCTGCGAAC TGCTCGGCAT CGAGTACGAA
CCGCCCGGCA AGGCGGAGAC GGGTGATTCG TGA
 
Protein sequence
MLRDNGGAVT NRRERLRAAL DRDLRRTARR LLVSGGIDAV TLAAIAREVG ITPPAIYRYY 
KSRDDLIYTL AEDVIGELVG ELRAAAAEHP ERPDRQLIAM IRAFTGWAAK NRAEYGFVFG
VPSPTVDDVY REIAKAWTVK IGGTFGEPYL RLWRQRPFDV PAESELEPAL QKQLDSYRAL
VGLERMPLGA ILVFIECWSR MYASMSFDVF GLMSATFTDM TPMHERMCRG VCELLGIEYE
PPGKAETGDS