Gene Svir_35260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_35260 
Symbol 
ID8388847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3842008 
End bp3842733 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content68% 
IMG OID644977543 
Producthypothetical protein 
Protein accessionYP_003135311 
Protein GI257057479 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.620875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGGAAC ACCTCAAAAA GCTCACCAGC GAGTTGGCCA GTGCGGCACG ACATCGCGAC 
GAGGCCACGG CATCGGTCGC CGAGTTGACG AAGGCGCTGA GCTACGCGCA GAAGGAACTC
GCCGACACCA AGAACGCGCT GGCTCGCATG GTGGAGGACC CGGCAGGTCC CGCCGCCATG
ACCGAACGGG TCAAGACCAT GATGCGGCTC GCCGAGGAGG AGATCACCGA ACTCCGGGCG
AAGGCCGAGA AGGACGCGGC CGACATGCGC GCCGCCGCCG ACGCCTACGC CGAGAAGACC
AGGACGAAGG CGCAGGCGGA AGCGGAGAAA CTCACGGCGG AGGCCGCGCG GGAGCGGGAC
CGTCTCGATG AGGAGGCCCG GCAACGACGC GAGGAACAGC GCAAGGCCGT GGAGGAGGAA
CTCGCCGCCA AACGCAAGAA GGTGGAGAAG GAGGTCGAGG AGCTGCGGCG GATCACCAAG
GAGAAGGCCG ACGCGATGTT GGCCGAGGCC GAGAGCAGGT TCGCCGAAGC CCGGACGGTG
CGTAAGGAGG CCTACGAGTT CCGGGCCGCG GTGTTCGAAC GGCTCACCGC GAGTCAGTCG
GTGCTGCAGC AGGCCGTCGA ACGTCTGGGC GCCGATCCGA CTCCGGCGCA GCTCGACGAA
CAGGACCGAC GGAGCGCGGC ACGGGCGTCC GCCGATCCGG CCGACGGGGA GAAGCAACCG
GCCTGA
 
Protein sequence
MEEHLKKLTS ELASAARHRD EATASVAELT KALSYAQKEL ADTKNALARM VEDPAGPAAM 
TERVKTMMRL AEEEITELRA KAEKDAADMR AAADAYAEKT RTKAQAEAEK LTAEAARERD
RLDEEARQRR EEQRKAVEEE LAAKRKKVEK EVEELRRITK EKADAMLAEA ESRFAEARTV
RKEAYEFRAA VFERLTASQS VLQQAVERLG ADPTPAQLDE QDRRSAARAS ADPADGEKQP
A