| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_35120 |
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| Symbol | |
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| ID | 8388834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3815204 |
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| End bp | 3815890 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644977532 |
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| Product | haloacid dehalogenase superfamily protein |
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| Protein accession | YP_003135300 |
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| Protein GI | 257057468 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.860746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTCG AAGCGGTCCT GTTCGACTTC TCGGGAACGC TGTTCCGCCT GGAGCACGAC
CCGAGCTGGC TGGTCGACAT CACGGATCAC CGTGGTGATC CGCTCGACGT CGAGGCACAG
GCCGAACTGA TGCGGCGCAT GACCGCGCCG GTCACGTTGG CGGTGGAACT CGACGAGGAA
CATCTGCACG CCTGGCGGAA CCGGGATCTC GATCCGGCCC TGCACCGCAA GGCGTACCTG
GAGGTGTTGC GGCGATCCGG CATCCCGCGT GTGGAACAGG CCAAGGCACT GTACGGGAAG
CTGACCGACC CGTCGGCGTG GACGCCGTAC CCGGATGCCG CCGAAGCGCT GCGGAGAGTG
TCCGATTCCG GGCTCGCCGT GGGCGTGCTG AGCAACATCG CCTTCGACAT CCGCCCCGCG
TTCGTCGAAC ACGGCCTCGA CACCTACGTC GACGAGTTCG TCCTCTCCTA CGAGATCGGC
GCGATCAAAC CCGAACCCGC CGCGTTCCGC ACCGCGCTCG ACCTGTTGGG GGCGGCTCCC
CAACGCACCC TGATGGTCGG TGACAGCGAC GAGGCCGACG GTGGCGCCCG CCGGCTGGGA
TGCGCGTTCG CGCAAGTCGA CCCACTACCG ACGACAGAAC GCCCGGACGG GCTGCTGAGC
GCCCTGCGCG AGCATTCCGT GCTCTGA
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| Protein sequence | MAVEAVLFDF SGTLFRLEHD PSWLVDITDH RGDPLDVEAQ AELMRRMTAP VTLAVELDEE
HLHAWRNRDL DPALHRKAYL EVLRRSGIPR VEQAKALYGK LTDPSAWTPY PDAAEALRRV
SDSGLAVGVL SNIAFDIRPA FVEHGLDTYV DEFVLSYEIG AIKPEPAAFR TALDLLGAAP
QRTLMVGDSD EADGGARRLG CAFAQVDPLP TTERPDGLLS ALREHSVL
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