| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_34990 |
|---|
| Symbol | |
|---|
| ID | 8388821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 3800718 |
|---|
| End bp | 3802079 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644977519 |
|---|
| Product | Zn-dependent hydrolase, glyoxylase |
|---|
| Protein accession | YP_003135288 |
|---|
| Protein GI | 257057456 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.848513 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGTCG AGGTCGTTCG CACCGATGCG TTGGGGGATC GCAGCTACCT GGTCCATGAC
GGTGCCGTCG GTGTGGTGAT CGACCCGCAG CGCGACTTCG ACCGGATCGA GAGGCTGGCA
CGGGATCGGG GCGTGCGCAT CTCGCATGTC GCCGAGACGC ATCTGCACAA CGACTACGTC
ACCGGGGGTC CCGAGCTCGC ACGGCGGCAC GGCGCCGTCT ATCTCGTCGG GGAGACCGAG
GGACTCGACT ACGAGGCGAC CCGACTGGAA TCGGGCGACC GCGTCGACGT CGGCGCGCTC
TCGCTGACAG CCGTGGCCAC GCCCGGACAC ACCGACAACC ACCTGGCCTA CATCGTCGAC
CACGACGGCG AGCAGGCGGT GTTCTCCGGC GGGAGTCTGC TGTACGGGTC GGTGGGGCGT
CCCGATCTCG TCGATCCCGA ACGGACCACC GAACTGGCCA AAGCGCAATA CCGTTCGGCG
CGTCGGCTCG TGGACTCCGT CTCCGACGAC GCGGTGCTCT ACCCGACGCA TGGGTTCGGC
AGCTTCTGTG CCTCCGACAC CGCCGCGACG ACCGAAAGCT CCACGATCGG GGAACAGCGC
CGTACCAATC GGGCCCTGAC CGACACCGAC GAGGATCACT TCGTCGAGCG ACTGTTGGCG
AACCTCACCG ATTACCCCTC CTACTACGCG CACATGGCCC CGTTGAACCG CGCCGGACTG
GCCGCGCCGA GGTTGGAGCT TCCGGAGCCG GTGGACCTCG AAACGCTGCG GAAACGGCTC
GCCGACGGCG AGTGGGTGGT GGATCTGCGG GACCGCGTCG CCTTCGCCGC CAAGCACGTG
GAGGGAACGG TGAGTTTCGA GTACGGCGAC GGTACGCGTT TCACGACGTT CCTCGGCTGG
ACGTTGCCGT GGCTCGATCC CGTGACCCTC GTGGGCTCGG AGGAGGACGT GCGTGCCGCG
ATCCGGGACC TGTCCCGGAT CGGCATCGAC GACCCGGACG TCGCACTGGG CGATCCCACC
GAACGGTTCG CGGACGAATT GCCCATGTCG TCTTATCCGA GCGTGGGGTG GGAGGAGCTG
GCCGCCGAAT TCCGGCGAGG CGCCGCCCCG ACGGTGTTGG ACGTGCGCCG CATCGACGAG
TACGAGAACG AACACATCGA CGGCGCGGTC AACATCCCGC TACACGAGTT GCTCACCCGG
ATCTCCGAGC TCGGGGACGA GCGTATTTGG GTCCATTGTG GATCAGGATA TCGGGCCTCG
ACGGCCGCCA GCCTCCTCGA TCGCGCGGGT TACGACGTCG TGCACATCGA CAGTGACTTC
GCCGACGTCG TCAAGGCCGG AATCCCGCTG AGTCGAAGGT GA
|
|---|
| Protein sequence | MHVEVVRTDA LGDRSYLVHD GAVGVVIDPQ RDFDRIERLA RDRGVRISHV AETHLHNDYV
TGGPELARRH GAVYLVGETE GLDYEATRLE SGDRVDVGAL SLTAVATPGH TDNHLAYIVD
HDGEQAVFSG GSLLYGSVGR PDLVDPERTT ELAKAQYRSA RRLVDSVSDD AVLYPTHGFG
SFCASDTAAT TESSTIGEQR RTNRALTDTD EDHFVERLLA NLTDYPSYYA HMAPLNRAGL
AAPRLELPEP VDLETLRKRL ADGEWVVDLR DRVAFAAKHV EGTVSFEYGD GTRFTTFLGW
TLPWLDPVTL VGSEEDVRAA IRDLSRIGID DPDVALGDPT ERFADELPMS SYPSVGWEEL
AAEFRRGAAP TVLDVRRIDE YENEHIDGAV NIPLHELLTR ISELGDERIW VHCGSGYRAS
TAASLLDRAG YDVVHIDSDF ADVVKAGIPL SRR
|
|---|
| |