| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_34960 |
|---|
| Symbol | |
|---|
| ID | 8388818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 3797368 |
|---|
| End bp | 3798078 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644977516 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003135285 |
|---|
| Protein GI | 257057453 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4821] Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0545229 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.520558 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGACC GCGTCCGGAA GCTGCTCGAC ACCATCGACT CCCAGCAGGG AGAACTGCGT
AAGGCCGCCG AGCTGGTGCT CGATGCGGTC GACGGTGGCG GCATCGTCCA CGCCGCGGGG
GCGGGACACT CCCTGGCGAT GGTGTGTGAG ACGTTCTACC GCGCGGGTGG ACTCGCTGCG
GTCAGACCGT TGTGGGATAC CGATGTGTTG CCGTTGTCGG GGGCGTTGCG CAGCTCGGCG
GCGGAACGCG TGCCCGGTCG GGGGCGTGCG CTGGTCGAAC GCGCCGATGT GCGACGCGGC
GATGTCGTGG TGGTGTTCTC CACCAGCGGA CGTAACCCCT ACCCCGTGGA GATCGCGCAG
GAGGCGTTGG CACGGGGCGT GCCGGTCATC GCCGTCACCT CGTCGGTGGC CTCGGCCGCG
GCGGCGGACC GCAGCGGCAC GAGCCTGGCC GAACACGCCA CCGTCGTGCT CGACACGAAC
GTCCCGGCCG GCGACGTCGT GCACCCCGCT CAGGCACCGC GTACCTCGGC GGTCTCCACG
ATCGTCGGGG CGTACGTGTG GTCGGCGTTG CTGGCGGAAC TGGACAGCCT CGCCGAGGAG
CGTGGAGCCG AACTACCCGT GTGGACCAGC GCCAACGTTC CCGGTGGGGA CGAACGTAAC
GTCGAACTCG TGGCGCGTTA CAGCGATCGT ATCCCCGAAC TGTCGTACTG A
|
|---|
| Protein sequence | MRDRVRKLLD TIDSQQGELR KAAELVLDAV DGGGIVHAAG AGHSLAMVCE TFYRAGGLAA
VRPLWDTDVL PLSGALRSSA AERVPGRGRA LVERADVRRG DVVVVFSTSG RNPYPVEIAQ
EALARGVPVI AVTSSVASAA AADRSGTSLA EHATVVLDTN VPAGDVVHPA QAPRTSAVST
IVGAYVWSAL LAELDSLAEE RGAELPVWTS ANVPGGDERN VELVARYSDR IPELSY
|
|---|
| |