Gene Svir_34950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_34950 
Symbol 
ID8388817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3796974 
End bp3797291 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content64% 
IMG OID644977515 
Productanti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
Protein accessionYP_003135284 
Protein GI257057452 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0660877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.672148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGG CAGACGTCGT CGTCCACGCG CAGGGCAGCA CCATCGAGAT CCGGCTCAGC 
GGTGAGATCG ACCTGTCGAA CAGCGACGCG GTGCGGGAGA AGATCTTCGC CTCGATCAGC
AATCACCTCG TCGCCGTGAC CCTCGACCTC AGCGAGGTGT CCTATATCGA CAGCGCGGGA
CTGCGTGTCC TGTTCGCACT CACCGAACGG CTCCGGCTGT TGCAGACCAA ATGCACGATG
ATCGCGCCCC CAGGATCACC CACCCGCCGG GTCCTGGAGA TGACGGGCAT GAACTCCGTG
GCGGAACTGA AACCCTGA
 
Protein sequence
MTAADVVVHA QGSTIEIRLS GEIDLSNSDA VREKIFASIS NHLVAVTLDL SEVSYIDSAG 
LRVLFALTER LRLLQTKCTM IAPPGSPTRR VLEMTGMNSV AELKP