Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_34950 |
Symbol | |
ID | 8388817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3796974 |
End bp | 3797291 |
Gene Length | 318 bp |
Protein Length | 105 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644977515 |
Product | anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
Protein accession | YP_003135284 |
Protein GI | 257057452 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0660877 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.672148 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCGG CAGACGTCGT CGTCCACGCG CAGGGCAGCA CCATCGAGAT CCGGCTCAGC GGTGAGATCG ACCTGTCGAA CAGCGACGCG GTGCGGGAGA AGATCTTCGC CTCGATCAGC AATCACCTCG TCGCCGTGAC CCTCGACCTC AGCGAGGTGT CCTATATCGA CAGCGCGGGA CTGCGTGTCC TGTTCGCACT CACCGAACGG CTCCGGCTGT TGCAGACCAA ATGCACGATG ATCGCGCCCC CAGGATCACC CACCCGCCGG GTCCTGGAGA TGACGGGCAT GAACTCCGTG GCGGAACTGA AACCCTGA
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Protein sequence | MTAADVVVHA QGSTIEIRLS GEIDLSNSDA VREKIFASIS NHLVAVTLDL SEVSYIDSAG LRVLFALTER LRLLQTKCTM IAPPGSPTRR VLEMTGMNSV AELKP
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