| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_34910 |
|---|
| Symbol | |
|---|
| ID | 8388813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 3791801 |
|---|
| End bp | 3792565 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644977511 |
|---|
| Product | Predicted membrane-bound metal-dependent hydrolase (DUF457) |
|---|
| Protein accession | YP_003135280 |
|---|
| Protein GI | 257057448 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.199547 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGGTC GCACCCATGC GCTGACCGGT TGGTGTGCAG GGCTGGCCGT GGCGCCTGCG
GTTGGCATCA CCACACTGTC CCAAGCCCTC GTGTTCGCGG CGACGACCGC GGGCTACGCC
CTGTTACCGG ACCTCGATCA CCCCGGCGCG CGGGCGTCCA AACTGCTGGG GCCGGTGACC
GGAGGGCTGT CGTGGCTGTT GAGAAACGCC TCGGCCGCGC TGTACTCCGT GACGAAAGGG
CCGAGGGACG AACGGAAGAA GGGTGGCCAC CGGCACCTTT CGCACACATT GTTGTTCGCC
CTGTTGCTCG GAGGGGCGAC AGCGGCGGGC ACCGCGTTCG GCGGCCCGTG GGTCGTGGTC
GGCGTGGTCG TATTCGGTCT GTTGCTCGCC GAGGACGCTC TCGGCGACTG GTTGCTTCCG
GTGGCCTGTG GAGCGGTCGT GTGGTGGGTG GTCGAGAACA GCCCCGACGT GCTCGCGCAA
CTCGATTCGG TATCCGGGTG GCTCGGTATC GCGGTCGCGC TCGGCTGTTT CACGCACTGT
CTGGGTGACG CGCTCACCGA ATCGGGATGC CCGTTCCTGT TCCCGATCCC CATCGCGGGA
GAGACGTGGT ATGAATTGCG GCCTCCGAAA CGGCTCCGGT TCCGCACCGG GGACAAGGTG
GAGACCGGAG TCCTCTTCCC GGTTTTCTCG GTTCTGGCAG TGTTGTTGAT CCCCGGGGTG
TGGCCCGCCT TGCTCGGATT CTTCGACGAC GTGCTCAACC AGTAA
|
|---|
| Protein sequence | MMGRTHALTG WCAGLAVAPA VGITTLSQAL VFAATTAGYA LLPDLDHPGA RASKLLGPVT
GGLSWLLRNA SAALYSVTKG PRDERKKGGH RHLSHTLLFA LLLGGATAAG TAFGGPWVVV
GVVVFGLLLA EDALGDWLLP VACGAVVWWV VENSPDVLAQ LDSVSGWLGI AVALGCFTHC
LGDALTESGC PFLFPIPIAG ETWYELRPPK RLRFRTGDKV ETGVLFPVFS VLAVLLIPGV
WPALLGFFDD VLNQ
|
|---|
| |